Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 MIR4273-201ENST00000582824 84 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 MTND5P30-201ENST00000452896 1731 ntBASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SSX2IPQ9Y2D8 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 RNA5SP38-201ENST00000410750 119 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC098831.1-201ENST00000440661 216 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC011816.1-201ENST00000441346 546 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC124916.1-201ENST00000444020 547 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 RN7SL75P-201ENST00000461926 281 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 RPL30P14-201ENST00000482744 348 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC022493.2-201ENST00000506122 481 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC010186.2-204ENST00000537668 439 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 RPL12P50-201ENST00000603116 116 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC083806.3-201ENST00000614016 455 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX2IPQ9Y2D8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-270P-201ENST00000364131 105 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 U8.8-201ENST00000365399 135 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 MIR518D-201ENST00000385014 87 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AC099548.1-201ENST00000421443 426 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 RPL26P9-201ENST00000457466 433 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AC068781.1-201ENST00000488231 618 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 RNA5SP367-201ENST00000516557 118 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 RN7SKP295-201ENST00000517264 153 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AC024153.1-201ENST00000603103 365 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AC006023.1-201ENST00000603944 259 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AL162730.1-201ENST00000605734 292 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 MIR3976-201ENST00000606807 139 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 MIR8076-201ENST00000611401 83 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 MIR6134-201ENST00000617606 109 ntBASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX2IPQ9Y2D8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 SNORA63C-201ENST00000364578 129 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-898P-201ENST00000365627 104 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.428-201ENST00000384078 102 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 SNORA46-201ENST00000384762 135 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 MIR521-1-201ENST00000384902 87 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 RPS29P13-201ENST00000402041 169 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AL591034.2-201ENST00000402839 359 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 UQCRHP3-201ENST00000451503 251 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 HMGN1P10-201ENST00000474557 553 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.661-201ENST00000516003 99 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-699P-201ENST00000517081 110 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AP005902.1-201ENST00000521358 186 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 VN1R107P-201ENST00000601784 209 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 HSPE1P7-201ENST00000604681 321 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AL033523.1-201ENST00000605153 153 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC005046.1-201ENST00000608515 625 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC138627.2-201ENST00000624202 601 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 AC096644.4-201ENST00000563417 2912 ntBASIC3.23□□□□□ -1.89
SSX2IPQ9Y2D8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 RNU6-428P-201ENST00000362942 107 ntBASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 Y_RNA.145-201ENST00000363527 102 ntBASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 AC243428.1-201ENST00000421099 264 ntBASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 BX276092.3-201ENST00000424182 230 ntBASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 RPS27AP10-201ENST00000496103 208 ntBASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.22□□□□□ -1.89
SSX2IPQ9Y2D8 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms