Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU6-23P-201ENST00000363283 107 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNU6-457P-201ENST00000363999 107 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNY4P34-201ENST00000364779 95 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNU6-1245P-201ENST00000411130 106 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.37□□□□□ -2.19
TREX1Q9NSU2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TREX1Q9NSU2 CBX3P6-201ENST00000430257 527 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 TAF9P1-201ENST00000445421 515 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 TAF9P2-201ENST00000454958 515 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RPS29P29-201ENST00000456396 171 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 SNRPGP7-201ENST00000469016 106 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 MTCYBP35-201ENST00000503630 1137 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AC074344.1-201ENST00000512823 224 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNU2-46P-201ENST00000517038 113 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 RNU6-685P-201ENST00000517088 95 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AL356057.1-201ENST00000533798 831 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 PRR13P7-201ENST00000605538 430 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AL451064.1-201ENST00000607718 471 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AC009159.2-201ENST00000617603 606 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AC131159.1-201ENST00000621854 213 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 AC130454.1-201ENST00000622948 401 ntBASIC1.37□□□□□ -2.19
TREX1Q9NSU2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TREX1Q9NSU2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 SNORD115-7-201ENST00000365306 82 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 RNU6-169P-201ENST00000365336 107 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.560-201ENST00000384689 102 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MTND5P25-201ENST00000430499 799 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC007969.2-201ENST00000441891 191 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MTCYBP18-201ENST00000501056 747 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC114801.2-201ENST00000503825 781 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MIR449C-201ENST00000516047 92 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 Vault.3-201ENST00000516676 95 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MIR548AB-201ENST00000584917 84 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 WISP1-OT1-201ENST00000602893 642 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AP001485.1-201ENST00000604799 199 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC091304.9-201ENST00000612091 226 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 AC004223.4-201ENST00000612426 332 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 RMST_4.1-201ENST00000616886 107 ntBASIC1.36□□□□□ -2.19
TREX1Q9NSU2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 RNU6-1287P-201ENST00000362914 107 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 U8.10-201ENST00000384260 133 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 RNU6-45P-201ENST00000384471 107 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 RNU6-1222P-201ENST00000384615 107 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 RNU6-1060P-201ENST00000384664 107 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 OR6C66P-201ENST00000414917 930 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 HSPE1P24-201ENST00000450782 238 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 MIR4498-201ENST00000577599 66 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 BNIP3P8-201ENST00000597863 560 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC022022.2-201ENST00000602989 360 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC011458.1-201ENST00000604034 617 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AL022161.1-201ENST00000604390 213 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AP000654.2-201ENST00000605633 586 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AL136370.1-201ENST00000608166 691 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.35□□□□□ -2.19
TREX1Q9NSU2 ZNF680P1-201ENST00000436625 1469 ntBASIC1.35□□□□□ -2.19
TREX1Q9NSU2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-37P-201ENST00000362692 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-11P-201ENST00000364234 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-25P-201ENST00000383873 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-1-201ENST00000383898 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-48P-201ENST00000384161 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-36P-201ENST00000384172 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-4P-201ENST00000384205 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-5P-201ENST00000384238 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-3P-201ENST00000384314 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-16P-201ENST00000384385 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-15P-201ENST00000384534 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-160P-201ENST00000384591 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-2-201ENST00000384627 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-29P-201ENST00000384637 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-9-201ENST00000384776 107 ntBASIC1.34□□□□□ -2.19
TREX1Q9NSU2 RNU6-33P-201ENST00000384793 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms