Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 HMGB1P33-201ENST00000563485 527 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AL353778.1-201ENST00000603149 408 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AP000654.2-201ENST00000605633 586 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AL512506.1-201ENST00000613918 449 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 U6.42-201ENST00000618440 107 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC092656.1-203ENST00000624134 423 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
KIAA1549Q9HCM3 SNORD114-23-201ENST00000363536 72 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNA5SP499-201ENST00000363982 119 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 SNORA25-201ENST00000384384 134 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 FCF1P10-201ENST00000407590 479 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 EBAG9P1-201ENST00000418955 543 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RPL31P3-201ENST00000458430 332 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC130509.1-201ENST00000464158 433 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 MED28P2-201ENST00000475771 317 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC109445.1-201ENST00000512356 383 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AP003122.4-201ENST00000530980 758 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1192P-201ENST00000612197 107 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-489P-201ENST00000618289 107 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-862P-201ENST00000362804 105 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 Y_RNA.332-201ENST00000365271 113 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNU5E-6P-201ENST00000365574 115 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 MIR301A-201ENST00000385261 86 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RN7SKP266-201ENST00000410232 287 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AL445305.1-201ENST00000432577 575 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AP000542.1-201ENST00000448473 371 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC003071.1-201ENST00000451219 789 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 snoU109.2-201ENST00000459316 135 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC104629.1-201ENST00000494226 508 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 RNU7-40P-201ENST00000516397 64 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC137800.2-201ENST00000574375 120 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 FRG1KP-201ENST00000623592 341 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 AC009033.1-201ENST00000624279 431 ntBASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
KIAA1549Q9HCM3 SNORD3E-201ENST00000362899 217 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-23P-201ENST00000363283 107 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-112P-201ENST00000363599 104 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNA5SP325-201ENST00000363756 130 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-26P-201ENST00000383985 107 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 SNORA75B-201ENST00000384053 137 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-72P-201ENST00000384285 79 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 MIR608-201ENST00000384820 100 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-817P-201ENST00000391083 104 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1245P-201ENST00000411130 106 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 ELOCP17-201ENST00000414751 326 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 VPS26BP1-201ENST00000417155 755 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 ELOCP9-201ENST00000418624 239 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC006366.1-201ENST00000422002 759 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC007327.1-201ENST00000447461 264 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC104806.1-201ENST00000508720 308 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC010376.1-201ENST00000522101 334 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC068587.4-201ENST00000533893 186 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC092325.1-201ENST00000566449 554 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC008751.2-201ENST00000597885 980 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AL138889.2-201ENST00000603883 242 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 AC018926.1-201ENST00000616335 435 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 MIR8063-201ENST00000621930 81 ntBASIC0.62□□□□□ -2.31
KIAA1549Q9HCM3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1019P-201ENST00000364424 107 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNU6-1274P-201ENST00000384557 107 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 Y_RNA.534-201ENST00000384599 112 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MIR19B1-201ENST00000384829 87 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RN7SKP61-201ENST00000410642 295 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MTCYBP5-201ENST00000423752 1135 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 CBX3P6-201ENST00000430257 527 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MTND2P4-201ENST00000445034 1004 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MTCO3P9-201ENST00000506989 781 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC113347.3-201ENST00000509113 148 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNVU1-2-201ENST00000516326 135 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 VN1R82P-201ENST00000601481 356 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AL590240.4-201ENST00000616908 390 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC068880.4-201ENST00000623082 495 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 MIR1248-201ENST00000629190 106 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RPL23AP30-201ENST00000432419 501 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC245047.4-201ENST00000433189 144 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 PGBD4P5-201ENST00000445958 426 ntBASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.61□□□□□ -2.31
KIAA1549Q9HCM3 RPL26P26-201ENST00000480251 434 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms