Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC108938.1-201ENST00000451204 136 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC090096.1-201ENST00000489168 390 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 RPS27AP10-201ENST00000496103 208 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MRPS36P2-201ENST00000512569 299 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 RNU6-1183P-201ENST00000517054 60 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 CYCSP27-201ENST00000527643 293 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MIR3941-201ENST00000582572 103 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 HMGN2P15-201ENST00000585707 270 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 MTND4LP5-201ENST00000605152 292 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC087045.1-201ENST00000605856 382 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 uc_338.5-201ENST00000611839 155 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC093913.1-201ENST00000614178 329 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC010378.1-201ENST00000619270 362 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 RMST_7.1-201ENST00000621935 268 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 AC099654.5-201ENST00000636479 350 ntBASIC2.67□□□□□ -1.98
UPF2Q9HAU5 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
UPF2Q9HAU5 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 RNU6-694P-201ENST00000364071 147 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 SNORD116-11-201ENST00000383882 92 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC016831.2-201ENST00000417179 352 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 PGBD4P6-201ENST00000421501 610 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 MTND1P17-201ENST00000448961 204 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 RPL26P9-201ENST00000457466 433 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 RN7SL636P-201ENST00000497504 294 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC008526.1-201ENST00000509149 338 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.682-201ENST00000516457 100 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 RNU6-566P-201ENST00000516790 107 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC022634.1-201ENST00000520765 532 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 RNU6-323P-201ENST00000521915 107 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 MIR4795-201ENST00000584182 89 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 ELOCP5-201ENST00000604924 333 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 uc_338.15-201ENST00000615470 191 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 Z69720.2-201ENST00000624755 279 ntBASIC2.66□□□□□ -1.98
UPF2Q9HAU5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF2Q9HAU5 Y_RNA.58-201ENST00000362807 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.154-201ENST00000363624 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.813-201ENST00000364639 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RNY3P1-201ENST00000365085 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RNY3-201ENST00000365484 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.490-201ENST00000384413 102 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 SNORA51.11-201ENST00000384442 131 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 Y_RNA.510-201ENST00000384511 114 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 MIR10A-201ENST00000385043 110 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 MIR888-201ENST00000401186 77 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC007560.1-201ENST00000426912 237 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL627311.1-201ENST00000431514 115 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL078601.1-201ENST00000444542 271 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL021397.1-201ENST00000451806 248 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RPL23AP70-201ENST00000483361 460 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 MTND5P5-201ENST00000503764 376 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC092436.3-201ENST00000511788 257 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RNA5SP200-201ENST00000516360 103 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RNU6-1332P-201ENST00000516666 104 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 RNA5SP454-201ENST00000517231 127 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC025423.5-201ENST00000550230 219 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL355375.2-201ENST00000574825 175 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC064836.2-201ENST00000609491 462 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AL359757.2-201ENST00000624309 274 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 AC006026.1-201ENST00000444025 1803 ntBASIC2.65□□□□□ -1.99
UPF2Q9HAU5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 RNU4-79P-201ENST00000362764 141 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 RNU6-95P-201ENST00000384697 107 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 MIR221-201ENST00000385135 110 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 MIR548F5-201ENST00000408421 86 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC023141.4-201ENST00000412031 328 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AL353729.1-201ENST00000425044 720 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC093019.1-201ENST00000443135 252 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 MTATP6P7-201ENST00000453315 681 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 RPS3P1-201ENST00000456781 192 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 RNU7-138P-201ENST00000459479 64 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC113155.1-201ENST00000511141 769 ntBASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.64□□□□□ -1.99
UPF2Q9HAU5 AC002984.1-201ENST00000591692 448 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms