Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC097463.2-201ENST00000421074 142 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 C8orf59P1-201ENST00000429930 303 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNU7-167P-201ENST00000459160 62 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC087884.1-201ENST00000469738 328 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RNA5SP401-201ENST00000515920 127 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC090115.3-201ENST00000553218 849 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AL512360.1-201ENST00000555346 234 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AL118558.2-201ENST00000556294 238 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 HMGB1P33-201ENST00000563485 527 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC011494.1-201ENST00000596454 237 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 AC123912.5-201ENST00000605470 343 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 uc_338.34-201ENST00000617467 174 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 MIR7157-201ENST00000635801 60 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 U4.7-201ENST00000638126 106 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 MTND5P30-201ENST00000452896 1731 ntBASIC2.13□□□□□ -2.07
RNF41Q9H4P4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
RNF41Q9H4P4 HAUS6P2-201ENST00000433254 2404 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MTND4P14-201ENST00000435799 1354 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-37P-201ENST00000362692 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-78P-201ENST00000362897 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-11P-201ENST00000364234 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-25P-201ENST00000383873 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-1-201ENST00000383898 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-48P-201ENST00000384161 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-36P-201ENST00000384172 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-4P-201ENST00000384205 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-5P-201ENST00000384238 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-3P-201ENST00000384314 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.480-201ENST00000384364 102 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-16P-201ENST00000384385 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-15P-201ENST00000384534 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.516-201ENST00000384541 124 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-2-201ENST00000384627 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-29P-201ENST00000384637 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-9-201ENST00000384776 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-33P-201ENST00000384793 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MIR218-1-201ENST00000384999 110 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MIR504-201ENST00000385065 83 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNA5SP489-201ENST00000410986 109 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC007677.1-201ENST00000445757 515 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 DYNLL1P5-201ENST00000467158 270 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MTCO3P38-201ENST00000468910 766 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RPL36AP48-201ENST00000485521 314 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC018437.1-201ENST00000492214 406 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RPS29P11-201ENST00000496507 171 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MIR514B-201ENST00000516774 80 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.704-201ENST00000516851 102 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MTND4P7-201ENST00000523876 130 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC016957.1-201ENST00000534895 309 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC010186.2-204ENST00000537668 439 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC136619.2-201ENST00000563361 631 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 TPRKBP2-201ENST00000565969 475 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MIR3199-1-201ENST00000582434 88 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 APOOP1-201ENST00000604695 592 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC021646.1-201ENST00000605469 484 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 RNU6-6P-201ENST00000606623 107 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC139792.2-201ENST00000624218 587 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 MIR3529-201ENST00000637713 78 ntBASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
RNF41Q9H4P4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 Z75746.1-201ENST00000440243 2080 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 RNU6-858P-201ENST00000362436 107 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 SNORD116-20-201ENST00000384529 92 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 Y_RNA.554-201ENST00000384672 102 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 MIR514A2-201ENST00000385131 88 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 MIR514A3-201ENST00000385132 88 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 SNORD56-201ENST00000413522 71 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 HMGB1P31-201ENST00000437242 427 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC013470.1-201ENST00000453438 462 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC112771.1-201ENST00000463581 102 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 SNORA25.11-201ENST00000515935 105 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC023050.3-201ENST00000541142 333 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.11□□□□□ -2.07
RNF41Q9H4P4 AC009127.3-201ENST00000570531 403 ntBASIC2.11□□□□□ -2.07
RNF41Q9H4P4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms