Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU6-704P-201ENST00000364162 103 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 RNA5SP366-201ENST00000365454 123 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 Y_RNA.383-201ENST00000383855 97 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 Y_RNA.435-201ENST00000384095 112 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 RNU6-918P-201ENST00000391219 106 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 PTMAP5-201ENST00000393073 333 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 Y_RNA.595-201ENST00000410403 105 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 RPL23AP46-201ENST00000438548 490 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC005042.3-201ENST00000453230 174 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 RPL30P14-201ENST00000482744 348 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC091167.1-201ENST00000492017 396 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC146944.2-203ENST00000502493 354 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC139495.1-202ENST00000513164 354 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 RNU7-200P-201ENST00000516105 62 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 CYCSP23-201ENST00000519781 313 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC115990.1-201ENST00000526957 301 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AC023043.4-201ENST00000612081 449 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 AL353746.1-201ENST00000566293 6881 ntBASIC4.12□□□□□ -1.75
TRIM56Q9BRZ2 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 SNORA26.3-201ENST00000391119 136 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 RPS26P42-201ENST00000413485 326 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AC245291.1-201ENST00000419501 328 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 MRPS10P1-201ENST00000448483 130 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 UQCRHP4-201ENST00000471686 272 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AC099522.1-202ENST00000514718 367 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 MRPL49P2-201ENST00000521066 465 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AP003730.1-201ENST00000524605 285 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 HSPE1P7-201ENST00000604681 321 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AP001485.1-201ENST00000604799 199 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 ARF4P1-201ENST00000605447 541 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AL591034.3-201ENST00000605511 685 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 MIR3653-201ENST00000625572 110 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AC008725.1-201ENST00000605123 2263 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 AC002543.1-201ENST00000299783 1954 ntBASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM56Q9BRZ2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AL359854.1-201ENST00000614203 1594 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AL109809.4-201ENST00000603520 2185 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC004944.1-201ENST00000517807 3059 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 SNORD35B-201ENST00000363660 87 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 SNORA72.2-201ENST00000365028 127 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RNU6-622P-201ENST00000384272 103 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RNU1-89P-201ENST00000384592 164 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RPL23AP48-201ENST00000406913 488 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RPL23AP26-201ENST00000412728 464 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RNA5SP246-201ENST00000458909 119 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RPS29P20-201ENST00000489592 171 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RNA5SP309-201ENST00000516670 106 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 ACA59.2-201ENST00000517061 156 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 CYCSP29-201ENST00000533731 318 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC025884.1-201ENST00000556034 378 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 RPL21P9-201ENST00000556149 474 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC090897.2-201ENST00000581715 130 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 MIR5684-201ENST00000585074 65 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 KLKP1-201ENST00000595979 403 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AL078605.1-201ENST00000603529 500 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AL359198.2-201ENST00000611836 194 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC010999.1-201ENST00000611856 324 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC068831.7-201ENST00000616954 363 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AC135776.4-201ENST00000624300 1904 ntBASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM56Q9BRZ2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 RNU6-1081P-201ENST00000384537 107 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 RPS26P8-201ENST00000393490 348 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 Y_RNA.597-201ENST00000410463 100 ntBASIC4.09□□□□□ -1.75
TRIM56Q9BRZ2 RN7SKP51-201ENST00000410781 304 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms