Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR3611-201ENST00000584484 83 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AL359999.1-201ENST00000604513 294 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 AC092354.1-201ENST00000606057 376 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.64□□□□□ -2.15
CDX2Q99626 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.64□□□□□ -2.15
CDX2Q99626 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.64□□□□□ -2.15
CDX2Q99626 RNU6-1280P-201ENST00000365211 107 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 RNU5E-5P-201ENST00000365379 116 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 Y_RNA.559-201ENST00000384686 107 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX2Q99626 RNU6-195P-201ENST00000411352 109 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC127391.1-201ENST00000411737 98 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.63□□□□□ -2.15
CDX2Q99626 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.63□□□□□ -2.15
CDX2Q99626 AC016831.2-201ENST00000417179 352 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX2Q99626 AC097463.2-201ENST00000421074 142 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 Z99497.1-201ENST00000421282 135 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.63□□□□□ -2.15
CDX2Q99626 AC007283.2-201ENST00000424739 197 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 RPL23AP30-201ENST00000432419 501 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX2Q99626 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX2Q99626 MTND1P30-201ENST00000441241 901 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX2Q99626 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.63□□□□□ -2.15
CDX2Q99626 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CDX2Q99626 AMD1P1-201ENST00000457220 922 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC093899.1-201ENST00000457984 376 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.63□□□□□ -2.15
CDX2Q99626 Y_RNA.689-201ENST00000516589 107 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AP002963.1-201ENST00000530590 184 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC022878.1-201ENST00000530684 149 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC078795.2-201ENST00000602835 1252 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL713866.2-201ENST00000603579 219 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC112191.3-201ENST00000604371 277 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL138963.2-201ENST00000605137 226 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC087045.1-201ENST00000605856 382 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC091304.9-201ENST00000612091 226 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AC092656.1-203ENST00000624134 423 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 RBBP8P1-201ENST00000449447 1844 ntBASIC1.63□□□□□ -2.15
CDX2Q99626 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.62□□□□□ -2.15
CDX2Q99626 AC073343.1-201ENST00000328239 651 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 Y_RNA.3-201ENST00000362331 103 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 SNORD114-27-201ENST00000363766 70 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 SNORD14B-201ENST00000364533 90 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RNU6-1119P-201ENST00000384349 108 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RNU6-1105P-201ENST00000384774 107 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 MIR558-201ENST00000384920 94 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 RN7SKP158-201ENST00000410453 326 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RNU2-32P-201ENST00000411193 191 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RN7SKP101-201ENST00000411376 320 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL030996.1-201ENST00000411430 235 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.62□□□□□ -2.15
CDX2Q99626 AL356583.2-201ENST00000426536 280 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL589872.1-201ENST00000426602 288 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC005534.2-201ENST00000431047 433 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 BTF3P15-201ENST00000455606 336 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL583843.1-201ENST00000456070 346 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RNU6-956P-201ENST00000458868 103 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 RPL36AP48-201ENST00000485521 314 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 HMGB3P17-201ENST00000504195 649 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 MTND3P5-201ENST00000512798 333 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC112206.3-201ENST00000514578 389 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.62□□□□□ -2.15
CDX2Q99626 AC024909.2-201ENST00000553035 286 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 MIR4528-201ENST00000577763 90 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 MIR3935-201ENST00000583472 104 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL109918.3-201ENST00000603072 338 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AL138889.2-201ENST00000603883 242 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC104073.3-201ENST00000610942 955 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 Z99129.1-201ENST00000612510 255 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC012409.4-201ENST00000612923 249 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 AC083806.3-201ENST00000614016 455 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.62□□□□□ -2.15
CDX2Q99626 AL603839.4-201ENST00000624658 1005 ntBASIC1.62□□□□□ -2.15
CDX2Q99626 Y_RNA.516-201ENST00000384541 124 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 RNY3P10-201ENST00000384764 102 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 RPS3AP36-201ENST00000398190 775 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 Y_RNA.623-201ENST00000411128 95 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 EEF1A1P40-201ENST00000412883 573 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 MTCO3P41-201ENST00000414801 328 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 CDK8P2-201ENST00000415020 547 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.61□□□□□ -2.15
CDX2Q99626 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.61□□□□□ -2.15
CDX2Q99626 HMGN2P19-201ENST00000425149 265 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AL354695.1-201ENST00000427935 228 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 MED13P1-201ENST00000428342 171 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.61□□□□□ -2.15
CDX2Q99626 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX2Q99626 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.61□□□□□ -2.15
CDX2Q99626 RPL22P13-201ENST00000493291 347 ntBASIC1.61□□□□□ -2.15
CDX2Q99626 MTND2P33-201ENST00000506452 1031 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms