Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AC026464.5-201ENST00000562497 722 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL161756.2-201ENST00000604597 246 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 MIR92B-201ENST00000607575 96 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL133215.3-201ENST00000609801 448 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 SNORD98-201ENST00000636377 67 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AC099654.14-201ENST00000638599 341 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -2
NR1H4Q96RI1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -2
NR1H4Q96RI1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.58□□□□□ -2
NR1H4Q96RI1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NR1H4Q96RI1 RNU1-72P-201ENST00000362976 153 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.58□□□□□ -2
NR1H4Q96RI1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
NR1H4Q96RI1 AL590135.1-201ENST00000422215 156 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AL590632.1-201ENST00000424289 371 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC019205.3-201ENST00000424573 156 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AL133396.1-201ENST00000432048 687 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.58□□□□□ -2
NR1H4Q96RI1 USP9YP8-201ENST00000441913 500 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 GPM6BP3-201ENST00000442797 145 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC016700.2-201ENST00000446011 156 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 Z75741.1-201ENST00000446793 314 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 MTND3P10-201ENST00000450967 341 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 PRSS3P4-201ENST00000453323 162 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC109925.1-201ENST00000478069 331 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC104564.1-201ENST00000493028 407 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC015911.1-201ENST00000495111 156 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 HMGB1P35-201ENST00000503360 598 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 SNORA67.7-201ENST00000516664 135 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 RNU6-567P-201ENST00000516746 107 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 RNA5SP454-201ENST00000517231 127 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 IGLV3-17-201ENST00000519099 244 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.58□□□□□ -2
NR1H4Q96RI1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.58□□□□□ -2
NR1H4Q96RI1 MIR4790-201ENST00000577799 79 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 MIR4429-201ENST00000580105 73 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 MIR8076-201ENST00000611401 83 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 AC009233.1-201ENST00000616477 371 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 MIR3651-201ENST00000630427 90 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 U6.105-201ENST00000637379 88 ntBASIC2.58□□□□□ -2
NR1H4Q96RI1 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.58□□□□□ -2
NR1H4Q96RI1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NR1H4Q96RI1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.58□□□□□ -2
NR1H4Q96RI1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
NR1H4Q96RI1 AC073346.2-201ENST00000624724 2058 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NR1H4Q96RI1 MIR22-201ENST00000362190 85 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.57□□□□□ -2
NR1H4Q96RI1 U3.19-201ENST00000390893 196 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AL360182.1-201ENST00000397433 468 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 RN7SKP32-201ENST00000410167 303 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.57□□□□□ -2
NR1H4Q96RI1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.57□□□□□ -2
NR1H4Q96RI1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.57□□□□□ -2
NR1H4Q96RI1 DAP3P1-201ENST00000441522 278 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
NR1H4Q96RI1 AL353572.1-201ENST00000442490 417 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 RPS3P1-201ENST00000456781 192 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AC117440.1-201ENST00000474107 571 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AL117351.2-201ENST00000513571 157 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 ACA59.1-201ENST00000515966 143 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 RNU1-54P-201ENST00000517181 120 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 PRELID2P1-201ENST00000552837 301 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AC021231.3-201ENST00000558497 370 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 MIR5680-201ENST00000577577 84 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.57□□□□□ -2
NR1H4Q96RI1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.57□□□□□ -2
NR1H4Q96RI1 POLR3GP2-201ENST00000588366 668 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.57□□□□□ -2
NR1H4Q96RI1 AL034555.1-201ENST00000604816 211 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AC124303.1-201ENST00000605703 360 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 AC019193.3-201ENST00000609144 554 ntBASIC2.57□□□□□ -2
NR1H4Q96RI1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.57□□□□□ -2
NR1H4Q96RI1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.57□□□□□ -2
NR1H4Q96RI1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
NR1H4Q96RI1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
NR1H4Q96RI1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NR1H4Q96RI1 SNORD62.1-201ENST00000362541 86 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 Y_RNA.151-201ENST00000363566 112 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 Y_RNA.279-201ENST00000364763 95 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 MIR183-201ENST00000384958 110 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 MIR517A-201ENST00000385001 87 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.56□□□□□ -2
NR1H4Q96RI1 MTND1P11-201ENST00000456661 876 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 RNU6-1088P-201ENST00000516850 104 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 AP005639.2-201ENST00000527592 928 ntBASIC2.56□□□□□ -2
NR1H4Q96RI1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.56□□□□□ -2
NR1H4Q96RI1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.56□□□□□ -2
NR1H4Q96RI1 CPDP1-201ENST00000579660 283 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 209.4 ms