Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 RPL38P4-201ENST00000502376 214 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC022447.4-201ENST00000504053 364 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RNU6-189P-201ENST00000516120 101 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RNU7-193P-201ENST00000516723 65 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 SNORD60.2-201ENST00000516883 86 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 RNU6-586P-201ENST00000517265 104 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 NDUFA5P6-201ENST00000542110 379 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL157687.1-201ENST00000554853 619 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL355297.2-201ENST00000604792 129 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AC092954.2-201ENST00000609103 430 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL161423.1-201ENST00000613700 262 ntBASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPUSD4Q96CM3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.41-201ENST00000362646 102 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-527P-201ENST00000363425 104 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-525P-201ENST00000363685 104 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 U3.12-201ENST00000364498 214 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU4-75P-201ENST00000364621 146 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU4-20P-201ENST00000365601 151 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.409-201ENST00000383990 98 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.517-201ENST00000384551 106 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 SNORA67.4-201ENST00000384688 142 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 MIR181A1-201ENST00000385026 110 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 MIR29B2-201ENST00000385055 81 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 SNORA26.3-201ENST00000391119 136 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-908P-201ENST00000410160 94 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RN7SKP61-201ENST00000410642 295 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 POLHP1-201ENST00000411806 470 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RPL23AP95-201ENST00000426806 265 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 DLGAP5P1-201ENST00000430307 464 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 MTCO2P3-201ENST00000442543 421 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RPL39P29-201ENST00000447779 157 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNU6-720P-201ENST00000516363 108 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 RNA5SP137-201ENST00000516833 135 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AL512360.1-201ENST00000555346 234 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 VN1R80P-201ENST00000597126 338 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC025165.5-201ENST00000602802 578 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AC018889.1-201ENST00000605372 397 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.7□□□□□ -2.14
RPUSD4Q96CM3 SNORD32A-201ENST00000364805 84 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 MIR676-201ENST00000390702 67 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 RPL17P50-201ENST00000396131 546 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 RNU2-48P-201ENST00000410694 191 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 SEPT14P3-201ENST00000439401 183 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 USP9YP8-201ENST00000441913 500 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AL732372.2-207ENST00000445840 183 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 SEPT14P2-201ENST00000453405 183 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 TPTE2P5-203ENST00000458118 728 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 SEPT14P4-201ENST00000513445 186 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 RNA5SP401-201ENST00000515920 127 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 RNA5SP200-201ENST00000516360 103 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 RNU6-506P-201ENST00000516553 94 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AC034114.1-201ENST00000520293 285 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 FO082796.1-201ENST00000523795 183 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AC118273.2-201ENST00000532092 465 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AL118558.2-201ENST00000556294 238 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AL162413.1-201ENST00000603198 110 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 AL627230.6-201ENST00000611129 280 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 CTSLP2-204ENST00000629029 392 ntBASIC1.69□□□□□ -2.14
RPUSD4Q96CM3 MIR1321-201ENST00000637766 79 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms