Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC006199.1-201ENST00000548728 219 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC079600.2-201ENST00000550076 130 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 TGIF1P1-201ENST00000558095 802 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 MTCO3P13-201ENST00000577757 781 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 BNIP3P16-201ENST00000589779 534 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 AC005034.5-201ENST00000604219 466 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 MIR7111-201ENST00000619751 72 ntBASIC3.7□□□□□ -1.82
SMC1BQ8NDV3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 RNU6-227P-201ENST00000362865 103 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 EIF4EP2-201ENST00000422816 654 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 MTND3P9-201ENST00000429526 346 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AL714022.1-201ENST00000439897 151 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 MTND4P19-201ENST00000446659 478 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 MRPL42P6-201ENST00000486397 371 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.661-201ENST00000516003 99 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 RNU6-581P-201ENST00000516214 105 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC023442.1-201ENST00000531247 422 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 CR383656.8-201ENST00000549046 145 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC016925.2-201ENST00000605108 242 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 uc_338.25-201ENST00000613756 156 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC090617.7-201ENST00000623952 126 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 SNORA50A-202ENST00000629536 136 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC068647.1-201ENST00000489539 2265 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC010680.1-201ENST00000590024 3590 ntBASIC3.69□□□□□ -1.82
SMC1BQ8NDV3 AC073073.2-201ENST00000609827 2578 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 MTND5P30-201ENST00000452896 1731 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.216-201ENST00000364205 93 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 RNU6-805P-201ENST00000365643 106 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 RNU6-308P-201ENST00000390957 107 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 RNU6-482P-201ENST00000391068 107 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 BTF3L4P2-201ENST00000392798 346 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 FTH1P15-201ENST00000406984 280 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 AC126124.2-201ENST00000413542 321 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 AC245291.1-201ENST00000419501 328 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 RPS15AP5-201ENST00000436276 388 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 AC010401.1-201ENST00000463867 348 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 ANXA2P1-201ENST00000505539 926 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 MIR4474-201ENST00000579189 78 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 AC040896.1-201ENST00000613819 479 ntBASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.68□□□□□ -1.82
SMC1BQ8NDV3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 MTND5P9-201ENST00000503854 1755 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 RNU1-75P-201ENST00000347264 129 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.5-201ENST00000362334 102 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.31-201ENST00000362574 102 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.252-201ENST00000364556 101 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 SNORA33.2-201ENST00000365413 134 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 SNORA22B-201ENST00000383876 138 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 Y_RNA.428-201ENST00000384078 102 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 PMCHL1-202ENST00000423102 261 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC087499.2-201ENST00000432861 149 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 IFNA11P-201ENST00000446352 526 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 FO393415.2-201ENST00000480085 343 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 RNU6-699P-201ENST00000517081 110 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 RN7SKP295-201ENST00000517264 153 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AP006245.1-201ENST00000522549 120 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 DEFB122-202ENST00000569013 197 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC009163.5-201ENST00000575421 637 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 SNORD53-201ENST00000579969 78 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC083806.3-201ENST00000614016 455 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC024581.2-201ENST00000619986 252 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC097372.5-201ENST00000623665 376 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
SMC1BQ8NDV3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AC117470.1-201ENST00000381974 330 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RNU6-639P-201ENST00000384074 107 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 MIR591-201ENST00000385290 95 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RNA5SP252-201ENST00000391131 119 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AC243428.1-201ENST00000421099 264 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AC099799.1-201ENST00000439809 192 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AL161651.1-201ENST00000440882 223 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 SNORD109B-201ENST00000458961 67 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 SNORD109A-201ENST00000459128 67 ntBASIC3.66□□□□□ -1.82
SMC1BQ8NDV3 RPS27P29-201ENST00000463110 252 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms