Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.57□□□□□ -2
PACS1Q6VY07 AC026371.1-201ENST00000551867 419 ntBASIC2.57□□□□□ -2
PACS1Q6VY07 AC103996.1-201ENST00000555468 102 ntBASIC2.57□□□□□ -2
PACS1Q6VY07 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.57□□□□□ -2
PACS1Q6VY07 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
PACS1Q6VY07 AC091152.3-201ENST00000604227 325 ntBASIC2.57□□□□□ -2
PACS1Q6VY07 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.57□□□□□ -2
PACS1Q6VY07 AC245884.12-201ENST00000615364 59 ntBASIC2.57□□□□□ -2
PACS1Q6VY07 TPTEP1-208ENST00000636884 213 ntBASIC2.57□□□□□ -2
PACS1Q6VY07 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PACS1Q6VY07 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.57□□□□□ -2
PACS1Q6VY07 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.57□□□□□ -2
PACS1Q6VY07 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
PACS1Q6VY07 Y_RNA.111-201ENST00000363248 100 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 SNORD116-11-201ENST00000383882 92 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 RNU6-1013P-201ENST00000384180 107 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 SNORD116-20-201ENST00000384529 92 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AL513475.1-201ENST00000406602 315 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.56□□□□□ -2
PACS1Q6VY07 AL117339.3-201ENST00000418733 162 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 NUP35P1-201ENST00000422734 947 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.56□□□□□ -2
PACS1Q6VY07 HMGB1P18-201ENST00000438801 619 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 SNRPEP8-201ENST00000442866 260 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC104389.3-201ENST00000445629 235 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 MTND4P17-201ENST00000470444 350 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC107222.1-201ENST00000510899 637 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.56□□□□□ -2
PACS1Q6VY07 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.56□□□□□ -2
PACS1Q6VY07 RNU6-566P-201ENST00000516790 107 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AP005639.2-201ENST00000527592 928 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.56□□□□□ -2
PACS1Q6VY07 AC009127.3-201ENST00000570531 403 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC005668.1-201ENST00000571142 476 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 MIR3117-201ENST00000584034 78 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 uc_338.5-201ENST00000611839 155 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 uc_338.15-201ENST00000615470 191 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 AC097372.5-201ENST00000623665 376 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 U4.7-201ENST00000638126 106 ntBASIC2.56□□□□□ -2
PACS1Q6VY07 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PACS1Q6VY07 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.56□□□□□ -2
PACS1Q6VY07 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.55□□□□□ -2
PACS1Q6VY07 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.55□□□□□ -2
PACS1Q6VY07 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PACS1Q6VY07 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-562P-201ENST00000362731 107 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 Y_RNA.142-201ENST00000363491 102 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-128P-201ENST00000383976 107 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-214P-201ENST00000384130 107 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-95P-201ENST00000384697 107 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-1009P-201ENST00000390996 107 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 U3.26-201ENST00000391236 204 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 MIR548F5-201ENST00000408421 86 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.55□□□□□ -2
PACS1Q6VY07 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.55□□□□□ -2
PACS1Q6VY07 ARL5AP4-201ENST00000430731 512 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AL365400.1-201ENST00000431854 640 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.55□□□□□ -2
PACS1Q6VY07 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.55□□□□□ -2
PACS1Q6VY07 AMD1P1-201ENST00000457220 922 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
PACS1Q6VY07 RNU6-377P-201ENST00000515965 102 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 RNA5SP454-201ENST00000517231 127 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.55□□□□□ -2
PACS1Q6VY07 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.55□□□□□ -2
PACS1Q6VY07 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.55□□□□□ -2
PACS1Q6VY07 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.55□□□□□ -2
PACS1Q6VY07 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AC063943.3-201ENST00000615562 356 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 AC080100.1-201ENST00000624239 5356 ntBASIC2.55□□□□□ -2
PACS1Q6VY07 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PACS1Q6VY07 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PACS1Q6VY07 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PACS1Q6VY07 SNORD62.1-201ENST00000362541 86 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 RNU6-336P-201ENST00000364891 107 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PACS1Q6VY07 RNU6-19P-201ENST00000384718 107 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 AL133475.1-201ENST00000404414 305 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 RNU2-52P-201ENST00000410680 190 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 PTGES3P4-201ENST00000426243 356 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 AC004383.1-201ENST00000438135 289 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.54□□□□□ -2
PACS1Q6VY07 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.54□□□□□ -2
PACS1Q6VY07 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.54□□□□□ -2
PACS1Q6VY07 MTND1P11-201ENST00000456661 876 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 RNU7-187P-201ENST00000458985 68 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 AC130509.1-201ENST00000464158 433 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 MED28P2-201ENST00000475771 317 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.54□□□□□ -2
PACS1Q6VY07 MTCYBP40-201ENST00000509390 1135 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 SNORD19.2-201ENST00000516978 73 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 AC105029.1-201ENST00000520250 669 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 GLYCAM1-201ENST00000546596 285 ntBASIC2.54□□□□□ -2
PACS1Q6VY07 PRELID2P1-201ENST00000552837 301 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms