Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RPS29P4-201ENST00000414733 161 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AF228730.4-201ENST00000421457 183 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC080013.2-201ENST00000460866 323 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC140059.1-201ENST00000489238 361 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 HMGN1P13-201ENST00000505795 138 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 RNU6-567P-201ENST00000516746 107 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 RN7SKP282-201ENST00000516824 299 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 CBX3P8-201ENST00000532412 525 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC105245.1-201ENST00000581934 244 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 7SK.7-201ENST00000603504 247 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC107871.2-201ENST00000612894 502 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC091903.1-201ENST00000624322 454 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AL450472.1-202ENST00000637286 180 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 AC073544.1-201ENST00000600110 1595 ntBASIC3.04□□□□□ -1.92
RNF220Q5VTB9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.04□□□□□ -1.92
RNF220Q5VTB9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AC243428.1-201ENST00000421099 264 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AC011816.1-201ENST00000441346 546 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 GSTA11P-201ENST00000452866 669 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 SNORA31.16-201ENST00000516773 139 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 SNORA31.26-201ENST00000517250 137 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 MIR3117-201ENST00000584034 78 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AL158827.2-201ENST00000602494 330 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AC073657.2-201ENST00000605661 303 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AL442067.2-201ENST00000614033 363 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AC092608.2-201ENST00000624427 218 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 AL691447.3-201ENST00000635020 330 ntBASIC3.03□□□□□ -1.92
RNF220Q5VTB9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.93
RNF220Q5VTB9 MTND5P10-201ENST00000603719 1809 ntBASIC3.03□□□□□ -1.93
RNF220Q5VTB9 Y_RNA.126-201ENST00000363382 111 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 Y_RNA.146-201ENST00000363549 102 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 RNU6-595P-201ENST00000363944 107 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 RNU6-890P-201ENST00000384121 107 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 RPS3P1-201ENST00000456781 192 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 RPL23AP75-201ENST00000491601 451 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC093303.1-201ENST00000514549 295 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 RNU6-264P-201ENST00000517134 104 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AL356280.1-201ENST00000603614 379 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 AL670379.2-201ENST00000604983 252 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 U3.45-201ENST00000607547 219 ntBASIC3.02□□□□□ -1.93
RNF220Q5VTB9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
RNF220Q5VTB9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 RNU4-9P-201ENST00000364951 139 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 Y_RNA.419-201ENST00000384041 102 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 SNORA36A-201ENST00000384221 132 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 RNA5SP494-201ENST00000410653 129 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC096664.2-201ENST00000411843 406 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC012306.1-201ENST00000423267 114 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 RNU6-1170P-201ENST00000515974 106 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 MIR3923-201ENST00000579521 83 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 MIR3922-201ENST00000585192 84 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AL078605.1-201ENST00000603529 500 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 CYP2C61P-201ENST00000604072 290 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 Z98751.3-201ENST00000604447 521 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AC080078.3-201ENST00000605407 463 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 AL160413.1-201ENST00000622780 310 ntBASIC3.01□□□□□ -1.93
RNF220Q5VTB9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3□□□□□ -1.93
RNF220Q5VTB9 RNY1P16-201ENST00000363063 111 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms