Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 U2.17-201ENST00000611454 95 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AL136221.1-201ENST00000621449 509 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.95□□□□□ -2.1
CKAP4Q07065 AC243829.7-201ENST00000633081 225 ntBASIC1.95□□□□□ -2.1
CKAP4Q07065 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CKAP4Q07065 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CKAP4Q07065 SNORA72.1-201ENST00000363485 129 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 Y_RNA.160-201ENST00000363677 92 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNU6-884P-201ENST00000363889 107 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 SNORD14B-201ENST00000364533 90 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNU6-1303P-201ENST00000364841 107 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 Z98749.2-208ENST00000381646 500 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 Y_RNA.530-201ENST00000384587 101 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNU6-1179P-201ENST00000384667 107 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNA5SP219-201ENST00000390940 113 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 U3.26-201ENST00000391236 204 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AL023284.1-201ENST00000403956 276 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 Y_RNA.623-201ENST00000411128 95 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 NDUFS5P4-201ENST00000412983 318 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 CYCSP48-201ENST00000417124 323 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.94□□□□□ -2.1
CKAP4Q07065 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.94□□□□□ -2.1
CKAP4Q07065 AL513185.2-201ENST00000425543 193 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 MTCO3P46-201ENST00000425787 232 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 HMGB1P9-201ENST00000429856 646 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC007547.1-201ENST00000462177 490 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 HMGB1P30-201ENST00000492455 606 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC079140.5-201ENST00000507882 310 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 SNORA14.1-201ENST00000516113 141 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 RNU6-572P-201ENST00000516724 80 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.94□□□□□ -2.1
CKAP4Q07065 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.94□□□□□ -2.1
CKAP4Q07065 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC010186.2-204ENST00000537668 439 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC007375.1-201ENST00000554513 578 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.94□□□□□ -2.1
CKAP4Q07065 AC090897.2-201ENST00000581715 130 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC008749.1-201ENST00000597650 306 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.94□□□□□ -2.1
CKAP4Q07065 AC092747.3-201ENST00000603769 301 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 Z82243.1-201ENST00000609432 473 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AL161423.1-201ENST00000613700 262 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CKAP4Q07065 AC022306.2-201ENST00000617563 647 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 U6.42-201ENST00000618440 107 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AL162373.1-201ENST00000620433 407 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC092794.2-201ENST00000620933 563 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC009033.1-201ENST00000624279 431 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 AC100810.6-201ENST00000638068 285 ntBASIC1.94□□□□□ -2.1
CKAP4Q07065 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CKAP4Q07065 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CKAP4Q07065 SNORA46.1-201ENST00000391069 153 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 EIF4E2P1-201ENST00000393781 255 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AL445529.1-201ENST00000398713 389 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 Y_RNA.604-201ENST00000410574 102 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC096664.2-201ENST00000411843 406 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC009161.1-201ENST00000417306 376 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 BPY2DP-201ENST00000422208 265 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.93□□□□□ -2.1
CKAP4Q07065 AL627311.1-201ENST00000431514 115 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.93□□□□□ -2.1
CKAP4Q07065 RPS15AP5-201ENST00000436276 388 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AL078601.1-201ENST00000444542 271 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AL583843.1-201ENST00000456070 346 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.93□□□□□ -2.1
CKAP4Q07065 AC087884.1-201ENST00000469738 328 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC083904.1-201ENST00000487828 231 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 RPS29P20-201ENST00000489592 171 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 RPS27AP10-201ENST00000496103 208 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 MIR892C-201ENST00000516410 77 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 RNU6-1069P-201ENST00000516612 133 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 RNU6-1183P-201ENST00000517054 60 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.93□□□□□ -2.1
CKAP4Q07065 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.93□□□□□ -2.1
CKAP4Q07065 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.93□□□□□ -2.1
CKAP4Q07065 CYCSP26-201ENST00000534107 320 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.93□□□□□ -2.1
CKAP4Q07065 AL355073.2-201ENST00000612106 557 ntBASIC1.93□□□□□ -2.1
CKAP4Q07065 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKAP4Q07065 Y_RNA.166-201ENST00000363730 102 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 RNU6-266P-201ENST00000364225 107 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 RNU6-1083P-201ENST00000384022 107 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC023141.4-201ENST00000412031 328 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AL353729.1-201ENST00000425044 720 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CKAP4Q07065 NDUFA5P4-201ENST00000436704 385 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC098614.3-201ENST00000438957 440 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC098831.1-201ENST00000440661 216 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.92□□□□□ -2.1
CKAP4Q07065 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC128713.1-201ENST00000471495 306 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC117503.1-201ENST00000472241 394 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 HMGN1P12-201ENST00000499125 195 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.92□□□□□ -2.1
CKAP4Q07065 AC025465.4-201ENST00000513422 638 ntBASIC1.92□□□□□ -2.1
CKAP4Q07065 AC046134.1-201ENST00000514454 666 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms