Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RPS23P4-201ENST00000487908 423 ntBASIC0.71□□□□□ -2.3
CCL20P78556 AC022447.4-201ENST00000504053 364 ntBASIC0.71□□□□□ -2.3
CCL20P78556 UBL5P1-201ENST00000507979 193 ntBASIC0.71□□□□□ -2.3
CCL20P78556 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.71□□□□□ -2.3
CCL20P78556 AC108078.2-201ENST00000510750 236 ntBASIC0.71□□□□□ -2.3
CCL20P78556 MTND2P31-201ENST00000512602 616 ntBASIC0.71□□□□□ -2.3
CCL20P78556 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.71□□□□□ -2.3
CCL20P78556 MIR3976-201ENST00000606807 139 ntBASIC0.71□□□□□ -2.3
CCL20P78556 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CCL20P78556 AC012676.2-201ENST00000619258 186 ntBASIC0.71□□□□□ -2.3
CCL20P78556 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
CCL20P78556 SNORD98-201ENST00000636377 67 ntBASIC0.71□□□□□ -2.3
CCL20P78556 RNU1-124P-201ENST00000363861 145 ntBASIC0.7□□□□□ -2.3
CCL20P78556 SNORA63D-201ENST00000364359 132 ntBASIC0.7□□□□□ -2.3
CCL20P78556 RNU6-1019P-201ENST00000364424 107 ntBASIC0.7□□□□□ -2.3
CCL20P78556 SNORA32.2-201ENST00000384049 122 ntBASIC0.7□□□□□ -2.3
CCL20P78556 SNORA29-201ENST00000384183 140 ntBASIC0.7□□□□□ -2.3
CCL20P78556 SNORA25-201ENST00000384384 134 ntBASIC0.7□□□□□ -2.3
CCL20P78556 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
CCL20P78556 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CCL20P78556 SNORA12.2-201ENST00000391040 156 ntBASIC0.7□□□□□ -2.3
CCL20P78556 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CCL20P78556 C1DP2-201ENST00000418167 426 ntBASIC0.7□□□□□ -2.3
CCL20P78556 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.7□□□□□ -2.3
CCL20P78556 MTND1P32-201ENST00000433043 938 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.7□□□□□ -2.3
CCL20P78556 snoU13.27-201ENST00000459278 104 ntBASIC0.7□□□□□ -2.3
CCL20P78556 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL20P78556 RNU1-41P-201ENST00000516161 162 ntBASIC0.7□□□□□ -2.3
CCL20P78556 RNU1-48P-201ENST00000516400 162 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AC022616.6-201ENST00000520479 119 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.7□□□□□ -2.3
CCL20P78556 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.7□□□□□ -2.3
CCL20P78556 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.7□□□□□ -2.3
CCL20P78556 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL20P78556 BNIP3P8-201ENST00000597863 560 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL139286.2-201ENST00000606838 396 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL139022.2-201ENST00000606934 443 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL451064.1-201ENST00000607718 471 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL512598.1-201ENST00000610158 273 ntBASIC0.7□□□□□ -2.3
CCL20P78556 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AL353770.2-201ENST00000620024 78 ntBASIC0.7□□□□□ -2.3
CCL20P78556 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.7□□□□□ -2.3
CCL20P78556 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.7□□□□□ -2.3
CCL20P78556 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.7□□□□□ -2.3
CCL20P78556 AC103706.2-201ENST00000638080 240 ntBASIC0.7□□□□□ -2.3
CCL20P78556 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCL20P78556 SNORD56.2-201ENST00000363242 71 ntBASIC0.69□□□□□ -2.3
CCL20P78556 SNORA7.1-201ENST00000363750 139 ntBASIC0.69□□□□□ -2.3
CCL20P78556 MIR194-1-201ENST00000384892 85 ntBASIC0.69□□□□□ -2.3
CCL20P78556 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CCL20P78556 RNU6-1245P-201ENST00000411130 106 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC114491.1-201ENST00000416095 246 ntBASIC0.69□□□□□ -2.3
CCL20P78556 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL20P78556 SNRPEP10-201ENST00000420249 274 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.69□□□□□ -2.3
CCL20P78556 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL20P78556 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL20P78556 MTCYBP39-201ENST00000437562 491 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC087343.1-201ENST00000477341 475 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC104982.1-201ENST00000478775 574 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL20P78556 SNORD116-28-201ENST00000516123 91 ntBASIC0.69□□□□□ -2.3
CCL20P78556 RNA5SP503-201ENST00000517047 117 ntBASIC0.69□□□□□ -2.3
CCL20P78556 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.69□□□□□ -2.3
CCL20P78556 AC087883.1-201ENST00000551882 391 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC109446.1-201ENST00000566172 220 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
CCL20P78556 SNORA59B-202ENST00000578183 701 ntBASIC0.69□□□□□ -2.3
CCL20P78556 MIR3118-1-201ENST00000581787 76 ntBASIC0.69□□□□□ -2.3
CCL20P78556 MIR3136-201ENST00000583498 78 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC013244.2-201ENST00000603396 103 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AC112187.2-201ENST00000604345 283 ntBASIC0.69□□□□□ -2.3
CCL20P78556 AL022345.2-201ENST00000606307 135 ntBASIC0.69□□□□□ -2.3
CCL20P78556 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.69□□□□□ -2.3
CCL20P78556 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.69□□□□□ -2.3
CCL20P78556 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CCL20P78556 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
CCL20P78556 RNU1-96P-201ENST00000364163 162 ntBASIC0.68□□□□□ -2.3
CCL20P78556 RNU6-142P-201ENST00000384019 107 ntBASIC0.68□□□□□ -2.3
CCL20P78556 RNU6-1176P-201ENST00000390955 107 ntBASIC0.68□□□□□ -2.3
CCL20P78556 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL20P78556 RNA5SP111-201ENST00000411386 101 ntBASIC0.68□□□□□ -2.3
CCL20P78556 EEF1A1P40-201ENST00000412883 573 ntBASIC0.68□□□□□ -2.3
CCL20P78556 ARL5AP1-201ENST00000418991 388 ntBASIC0.68□□□□□ -2.3
CCL20P78556 MTCO3P29-201ENST00000432119 779 ntBASIC0.68□□□□□ -2.3
CCL20P78556 RPL22P17-201ENST00000438729 315 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.68□□□□□ -2.3
CCL20P78556 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.68□□□□□ -2.3
CCL20P78556 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.68□□□□□ -2.3
CCL20P78556 TOMM22P6-201ENST00000465035 409 ntBASIC0.68□□□□□ -2.3
CCL20P78556 SNRPGP7-201ENST00000469016 106 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AC104806.1-201ENST00000508720 308 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.68□□□□□ -2.3
CCL20P78556 CYCSP23-201ENST00000519781 313 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.68□□□□□ -2.3
CCL20P78556 AP001893.2-201ENST00000526949 202 ntBASIC0.68□□□□□ -2.3
CCL20P78556 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.68□□□□□ -2.3
CCL20P78556 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.68□□□□□ -2.3
CCL20P78556 AC012507.3-201ENST00000603556 477 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms