Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.04□□□□□ -2.24
ACTBP60709 ADI1P3-201ENST00000549509 470 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.04□□□□□ -2.24
ACTBP60709 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
ACTBP60709 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.04□□□□□ -2.24
ACTBP60709 AL157392.4-201ENST00000609756 345 ntBASIC1.04□□□□□ -2.24
ACTBP60709 MIR8063-201ENST00000621930 81 ntBASIC1.04□□□□□ -2.24
ACTBP60709 AC068205.3-201ENST00000636385 468 ntBASIC1.04□□□□□ -2.24
ACTBP60709 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.04□□□□□ -2.24
ACTBP60709 LINC02555-201ENST00000563933 1951 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.03□□□□□ -2.24
ACTBP60709 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.03□□□□□ -2.24
ACTBP60709 MIR340-201ENST00000362125 95 ntBASIC1.03□□□□□ -2.24
ACTBP60709 RNU6-1285P-201ENST00000363480 105 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AL357139.1-201ENST00000407792 426 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.03□□□□□ -2.24
ACTBP60709 RPS27AP14-201ENST00000422868 454 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
ACTBP60709 RPL37P21-201ENST00000435890 276 ntBASIC1.03□□□□□ -2.24
ACTBP60709 UBE2V1P8-201ENST00000437166 265 ntBASIC1.03□□□□□ -2.24
ACTBP60709 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.03□□□□□ -2.24
ACTBP60709 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.03□□□□□ -2.24
ACTBP60709 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.03□□□□□ -2.24
ACTBP60709 KATNBL1P3-201ENST00000443475 909 ntBASIC1.03□□□□□ -2.24
ACTBP60709 RPS29P28-201ENST00000446439 141 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AL122001.1-201ENST00000457027 370 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AP000797.1-201ENST00000478870 387 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.03□□□□□ -2.24
ACTBP60709 AC108078.2-201ENST00000510750 236 ntBASIC1.03□□□□□ -2.24
ACTBP60709 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
ACTBP60709 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.03□□□□□ -2.24
ACTBP60709 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.03□□□□□ -2.24
ACTBP60709 AL050343.2-201ENST00000607338 280 ntBASIC1.03□□□□□ -2.24
ACTBP60709 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.03□□□□□ -2.24
ACTBP60709 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.03□□□□□ -2.24
ACTBP60709 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.03□□□□□ -2.24
ACTBP60709 AL391994.1-201ENST00000254724 282 ntBASIC1.02□□□□□ -2.25
ACTBP60709 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
ACTBP60709 RNY1P10-201ENST00000363268 113 ntBASIC1.02□□□□□ -2.25
ACTBP60709 Y_RNA.255-201ENST00000364581 97 ntBASIC1.02□□□□□ -2.25
ACTBP60709 SNORD1A-201ENST00000364968 72 ntBASIC1.02□□□□□ -2.25
ACTBP60709 SNORA29-201ENST00000384183 140 ntBASIC1.02□□□□□ -2.25
ACTBP60709 SNORA40.6-201ENST00000391153 128 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC114491.1-201ENST00000416095 246 ntBASIC1.02□□□□□ -2.25
ACTBP60709 MRPL35P3-201ENST00000421557 364 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC027119.1-201ENST00000440877 241 ntBASIC1.02□□□□□ -2.25
ACTBP60709 JTBP1-201ENST00000441314 247 ntBASIC1.02□□□□□ -2.25
ACTBP60709 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ACTBP60709 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.02□□□□□ -2.25
ACTBP60709 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ACTBP60709 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC004223.1-201ENST00000479840 271 ntBASIC1.02□□□□□ -2.25
ACTBP60709 RPL26P26-201ENST00000480251 434 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC104806.1-201ENST00000508720 308 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.02□□□□□ -2.25
ACTBP60709 SNORA3.4-201ENST00000515969 96 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.02□□□□□ -2.25
ACTBP60709 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AL078604.3-201ENST00000615580 211 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC104010.1-201ENST00000616889 150 ntBASIC1.02□□□□□ -2.25
ACTBP60709 AC006927.4-201ENST00000639187 543 ntBASIC1.02□□□□□ -2.25
ACTBP60709 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
ACTBP60709 RNU4-15P-201ENST00000362613 141 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RNU6-39P-201ENST00000384344 107 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RNU6-809P-201ENST00000384461 107 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RNU6-321P-201ENST00000410912 106 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.01□□□□□ -2.25
ACTBP60709 EBAG9P1-201ENST00000418955 543 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RPS27P16-201ENST00000425758 201 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AL589872.1-201ENST00000426602 288 ntBASIC1.01□□□□□ -2.25
ACTBP60709 Z82205.1-201ENST00000428456 297 ntBASIC1.01□□□□□ -2.25
ACTBP60709 C8orf59P1-201ENST00000429930 303 ntBASIC1.01□□□□□ -2.25
ACTBP60709 MTND5P25-201ENST00000430499 799 ntBASIC1.01□□□□□ -2.25
ACTBP60709 HMGN2P18-201ENST00000450680 270 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RPS29P29-201ENST00000456396 171 ntBASIC1.01□□□□□ -2.25
ACTBP60709 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.01□□□□□ -2.25
ACTBP60709 RPL36AP21-201ENST00000490372 323 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC116347.2-201ENST00000514912 523 ntBASIC1.01□□□□□ -2.25
ACTBP60709 RNA5SP490-201ENST00000517141 136 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.01□□□□□ -2.25
ACTBP60709 MIR5697-201ENST00000578045 78 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AL158032.1-201ENST00000605401 106 ntBASIC1.01□□□□□ -2.25
ACTBP60709 MIR6078-201ENST00000611069 100 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC092140.2-201ENST00000618027 521 ntBASIC1.01□□□□□ -2.25
ACTBP60709 AC026585.1-201ENST00000619582 524 ntBASIC1.01□□□□□ -2.25
ACTBP60709 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.01□□□□□ -2.25
ACTBP60709 Y_RNA.327-201ENST00000365201 102 ntBASIC1□□□□□ -2.25
ACTBP60709 SNORA24.1-201ENST00000384401 135 ntBASIC1□□□□□ -2.25
ACTBP60709 RNU6-1065P-201ENST00000384513 106 ntBASIC1□□□□□ -2.25
ACTBP60709 RNU6-906P-201ENST00000384700 70 ntBASIC1□□□□□ -2.25
ACTBP60709 MIR558-201ENST00000384920 94 ntBASIC1□□□□□ -2.25
ACTBP60709 RNU2-3P-201ENST00000410144 191 ntBASIC1□□□□□ -2.25
ACTBP60709 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1□□□□□ -2.25
ACTBP60709 AL590556.1-201ENST00000423231 483 ntBASIC1□□□□□ -2.25
ACTBP60709 RPL22P17-201ENST00000438729 315 ntBASIC1□□□□□ -2.25
ACTBP60709 AC112204.1-201ENST00000502591 103 ntBASIC1□□□□□ -2.25
ACTBP60709 AC108078.1-201ENST00000508073 725 ntBASIC1□□□□□ -2.25
ACTBP60709 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 203.6 ms