Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC136932.1-201ENST00000574771 208 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MIR5697-201ENST00000578045 78 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MIR4700-201ENST00000578311 74 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC008088.1-201ENST00000580993 280 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 MIR3136-201ENST00000583498 78 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC008752.3-201ENST00000588113 712 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC012507.3-201ENST00000603556 477 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC112187.2-201ENST00000604345 283 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AL158042.1-201ENST00000605338 460 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC013244.3-201ENST00000605614 388 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC010149.2-201ENST00000637608 315 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 U4.7-201ENST00000638126 106 ntBASIC0.65□□□□□ -2.31
HIST1H2BDP58876 AC243964.1-201ENST00000441814 261 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AC073910.1-201ENST00000445047 438 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.64□□□□□ -2.31
HIST1H2BDP58876 RPL31P3-201ENST00000458430 332 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AC010531.2-201ENST00000465012 153 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AC104982.1-201ENST00000478775 574 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 RNU6-351P-201ENST00000516097 100 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 RNU1-92P-201ENST00000517017 135 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AL442163.3-201ENST00000554110 156 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.64□□□□□ -2.31
HIST1H2BDP58876 MIR4661-201ENST00000582720 75 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.64□□□□□ -2.31
HIST1H2BDP58876 AC040896.1-201ENST00000613819 479 ntBASIC0.64□□□□□ -2.31
HIST1H2BDP58876 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.64□□□□□ -2.31
HIST1H2BDP58876 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RNU6-105P-201ENST00000363909 104 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 SNORD31B-201ENST00000364977 69 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 SNORA4.2-201ENST00000365313 147 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 MIR323B-201ENST00000385269 82 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RNA5SP201-201ENST00000410316 124 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 POLR2J4-204ENST00000418424 324 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC016925.1-201ENST00000458303 298 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC068587.2-201ENST00000478386 781 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RBBP4P6-201ENST00000508098 202 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 MTND3P25-201ENST00000509243 135 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RNU6-1041P-201ENST00000516254 102 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RNU6-1098P-201ENST00000516772 96 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 SNORA31.16-201ENST00000516773 139 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 RNA5SP337-201ENST00000517007 109 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC107304.1-201ENST00000604229 296 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC211469.2-201ENST00000605461 205 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 MIR6748-201ENST00000610433 71 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 AL157786.1-207ENST00000627771 695 ntBASIC0.63□□□□□ -2.31
HIST1H2BDP58876 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.63□□□□□ -2.31
HIST1H2BDP58876 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 SNORA24.1-201ENST00000384401 135 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 COX6CP10-201ENST00000416832 224 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 C1DP2-201ENST00000418167 426 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AL590135.1-201ENST00000422215 156 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC010099.3-201ENST00000423896 409 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC019205.3-201ENST00000424573 156 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 USP9YP14-201ENST00000430663 563 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC069257.2-201ENST00000441819 155 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC016700.2-201ENST00000446011 156 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 RNU7-14P-201ENST00000459331 62 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 SNRPGP7-201ENST00000469016 106 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 RPS26P45-201ENST00000471748 340 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC015911.1-201ENST00000495111 156 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 RNU6-165P-201ENST00000517170 99 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 ZNF321P-202ENST00000550843 495 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC021231.3-201ENST00000558497 370 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AP005136.1-201ENST00000579765 429 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 MIR5692A1-201ENST00000580523 69 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC008521.1-201ENST00000587471 187 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.62□□□□□ -2.31
HIST1H2BDP58876 BX323046.1-201ENST00000610145 535 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AL021879.1-201ENST00000611756 288 ntBASIC0.62□□□□□ -2.31
HIST1H2BDP58876 AC008163.1-202ENST00000636004 2889 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms