Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH13P55290 UBE2V1P4-201ENST00000425374 344 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AC007547.1-201ENST00000462177 490 ntBASIC2.39□□□□□ -2.03
CDH13P55290 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AC022447.4-201ENST00000504053 364 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH13P55290 RN7SKP24-201ENST00000515888 284 ntBASIC2.39□□□□□ -2.03
CDH13P55290 RNA5SP320-201ENST00000516263 124 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.39□□□□□ -2.03
CDH13P55290 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AP003033.1-201ENST00000527244 415 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AP000763.2-201ENST00000540641 163 ntBASIC2.39□□□□□ -2.03
CDH13P55290 AC025423.5-201ENST00000550230 219 ntBASIC2.39□□□□□ -2.03
CDH13P55290 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.39□□□□□ -2.03
CDH13P55290 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH13P55290 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
CDH13P55290 MIR7106-201ENST00000612419 65 ntBASIC2.39□□□□□ -2.03
CDH13P55290 U6atac.1-201ENST00000616025 117 ntBASIC2.39□□□□□ -2.03
CDH13P55290 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH13P55290 AL365361.1-201ENST00000566942 3481 ntBASIC2.39□□□□□ -2.03
CDH13P55290 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH13P55290 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
CDH13P55290 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH13P55290 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDH13P55290 SNORD32A-201ENST00000364805 84 ntBASIC2.38□□□□□ -2.03
CDH13P55290 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH13P55290 RNU6-43P-201ENST00000384302 107 ntBASIC2.38□□□□□ -2.03
CDH13P55290 RN7SKP61-201ENST00000410642 295 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AP000275.1-201ENST00000411943 390 ntBASIC2.38□□□□□ -2.03
CDH13P55290 RPL23AP95-201ENST00000426806 265 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH13P55290 AC092989.1-201ENST00000481235 277 ntBASIC2.38□□□□□ -2.03
CDH13P55290 SNORA48.11-201ENST00000517015 89 ntBASIC2.38□□□□□ -2.03
CDH13P55290 RN7SKP256-201ENST00000517201 314 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH13P55290 AP005902.1-201ENST00000521358 186 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH13P55290 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.38□□□□□ -2.03
CDH13P55290 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH13P55290 AC093249.1-201ENST00000567049 203 ntBASIC2.38□□□□□ -2.03
CDH13P55290 SNORA59B-202ENST00000578183 701 ntBASIC2.38□□□□□ -2.03
CDH13P55290 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH13P55290 AP001836.1-201ENST00000604675 523 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH13P55290 AC092608.2-201ENST00000624427 218 ntBASIC2.38□□□□□ -2.03
CDH13P55290 MIR3662-201ENST00000637030 95 ntBASIC2.38□□□□□ -2.03
CDH13P55290 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH13P55290 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 AC009161.1-201ENST00000417306 376 ntBASIC2.37□□□□□ -2.03
CDH13P55290 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 AC078809.1-201ENST00000427601 140 ntBASIC2.37□□□□□ -2.03
CDH13P55290 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 RNU7-66P-201ENST00000459469 62 ntBASIC2.37□□□□□ -2.03
CDH13P55290 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH13P55290 MTCYBP18-201ENST00000501056 747 ntBASIC2.37□□□□□ -2.03
CDH13P55290 AC008628.2-201ENST00000502605 298 ntBASIC2.37□□□□□ -2.03
CDH13P55290 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
CDH13P55290 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
CDH13P55290 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH13P55290 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH13P55290 MIR4658-201ENST00000584344 65 ntBASIC2.37□□□□□ -2.03
CDH13P55290 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 AL355297.2-201ENST00000604792 129 ntBASIC2.37□□□□□ -2.03
CDH13P55290 AC064836.2-201ENST00000609491 462 ntBASIC2.37□□□□□ -2.03
CDH13P55290 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.37□□□□□ -2.03
CDH13P55290 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH13P55290 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CDH13P55290 MTND4P23-201ENST00000447723 1363 ntBASIC2.36□□□□□ -2.03
CDH13P55290 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
CDH13P55290 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH13P55290 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.36□□□□□ -2.03
CDH13P55290 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDH13P55290 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
CDH13P55290 SNORA41-201ENST00000384675 132 ntBASIC2.36□□□□□ -2.03
CDH13P55290 MIR29B2-201ENST00000385055 81 ntBASIC2.36□□□□□ -2.03
CDH13P55290 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CDH13P55290 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
CDH13P55290 AC063976.3-201ENST00000426849 329 ntBASIC2.36□□□□□ -2.03
CDH13P55290 AL133396.1-201ENST00000432048 687 ntBASIC2.36□□□□□ -2.03
CDH13P55290 USP9YP8-201ENST00000441913 500 ntBASIC2.36□□□□□ -2.03
CDH13P55290 AL031659.1-201ENST00000447075 539 ntBASIC2.36□□□□□ -2.03
CDH13P55290 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
CDH13P55290 RPS3P1-201ENST00000456781 192 ntBASIC2.36□□□□□ -2.03
CDH13P55290 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.36□□□□□ -2.03
CDH13P55290 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH13P55290 AC092436.3-201ENST00000511788 257 ntBASIC2.36□□□□□ -2.03
CDH13P55290 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.36□□□□□ -2.03
CDH13P55290 RNU6-1332P-201ENST00000516666 104 ntBASIC2.36□□□□□ -2.03
CDH13P55290 RNU6-586P-201ENST00000517265 104 ntBASIC2.36□□□□□ -2.03
CDH13P55290 MTND4LP26-201ENST00000518144 282 ntBASIC2.36□□□□□ -2.03
CDH13P55290 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.36□□□□□ -2.03
CDH13P55290 SCOCP1-201ENST00000554676 349 ntBASIC2.36□□□□□ -2.03
CDH13P55290 MIR3136-201ENST00000583498 78 ntBASIC2.36□□□□□ -2.03
CDH13P55290 ELOCP5-201ENST00000604924 333 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms