Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC104237.2-201ENST00000612456 443 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC025253.1-201ENST00000613623 543 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC063943.3-201ENST00000615562 356 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 AC092608.2-201ENST00000624427 218 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.47□□□□□ -2.01
HNF4AP41235 MIR3529-201ENST00000637713 78 ntBASIC2.47□□□□□ -2.01
HNF4AP41235 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.47□□□□□ -2.01
HNF4AP41235 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.01
HNF4AP41235 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
HNF4AP41235 RNU6-1252P-201ENST00000363054 104 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 SNORD114-19-201ENST00000363072 75 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU6-254P-201ENST00000363377 107 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU6-1179P-201ENST00000384667 107 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU6-1009P-201ENST00000390996 107 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU6-510P-201ENST00000391239 108 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU2-3P-201ENST00000410144 191 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNA5SP184-201ENST00000411071 108 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 MTND3P8-201ENST00000412909 339 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.46□□□□□ -2.02
HNF4AP41235 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.46□□□□□ -2.02
HNF4AP41235 AC009238.1-201ENST00000442165 424 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC009237.6-201ENST00000446969 424 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU1-86P-201ENST00000516108 154 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU1-107P-201ENST00000516617 154 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RNU7-193P-201ENST00000516723 65 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AP004607.1-201ENST00000524456 203 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC087241.2-201ENST00000535801 324 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RAB11AP2-201ENST00000545905 639 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC026464.5-201ENST00000562497 722 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 RPS3AP23-202ENST00000574601 686 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 MIR5692A1-201ENST00000580523 69 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 MIR4742-201ENST00000581069 85 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 MIR3942-201ENST00000585264 109 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 U2.17-201ENST00000611454 95 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC093913.1-201ENST00000614178 329 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC008121.3-201ENST00000618726 433 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC010378.1-201ENST00000619270 362 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AC104985.2-201ENST00000620598 500 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 AL133216.2-202ENST00000634512 349 ntBASIC2.46□□□□□ -2.02
HNF4AP41235 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.46□□□□□ -2.02
HNF4AP41235 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HNF4AP41235 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HNF4AP41235 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HNF4AP41235 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HNF4AP41235 Y_RNA.142-201ENST00000363491 102 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 RNU6-384P-201ENST00000364900 104 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 Y_RNA.301-201ENST00000364990 103 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 Y_RNA.414-201ENST00000384011 101 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 Y_RNA.530-201ENST00000384587 101 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AL356432.1-201ENST00000405809 419 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 RNU6-607P-201ENST00000411283 108 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 CR769767.1-201ENST00000436337 346 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AL109933.2-201ENST00000452651 260 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.45□□□□□ -2.02
HNF4AP41235 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.45□□□□□ -2.02
HNF4AP41235 RPS27P27-201ENST00000498779 255 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.45□□□□□ -2.02
HNF4AP41235 SNORA14.1-201ENST00000516113 141 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 SNORA25.17-201ENST00000517184 124 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 CYCSP26-201ENST00000534107 320 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AP000763.2-201ENST00000540641 163 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.45□□□□□ -2.02
HNF4AP41235 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.45□□□□□ -2.02
HNF4AP41235 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.45□□□□□ -2.02
HNF4AP41235 FGF7P1-201ENST00000582820 288 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AC002044.1-201ENST00000606707 158 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HNF4AP41235 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AL031601.2-202ENST00000622650 282 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.45□□□□□ -2.02
HNF4AP41235 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.45□□□□□ -2.02
HNF4AP41235 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
HNF4AP41235 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.45□□□□□ -2.02
HNF4AP41235 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HNF4AP41235 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HNF4AP41235 Y_RNA.166-201ENST00000363730 102 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 Y_RNA.263-201ENST00000364659 114 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HNF4AP41235 EIF4E2P1-201ENST00000393781 255 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RN7SKP32-201ENST00000410167 303 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RNU2-41P-201ENST00000410991 178 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 AC138623.1-201ENST00000418060 216 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 NDUFA5P4-201ENST00000436704 385 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 HIGD1AP2-201ENST00000446367 280 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 MTND1P11-201ENST00000456661 876 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.44□□□□□ -2.02
HNF4AP41235 HMGB1P30-201ENST00000492455 606 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 AC103851.1-201ENST00000506833 274 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 AC008549.1-201ENST00000512900 643 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RNU6-1069P-201ENST00000516612 133 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RNU6-1088P-201ENST00000516850 104 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 SNORA48.11-201ENST00000517015 89 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.44□□□□□ -2.02
HNF4AP41235 MIR3126-201ENST00000577443 74 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 MIR3672-201ENST00000584290 82 ntBASIC2.44□□□□□ -2.02
HNF4AP41235 MIR5692C1-201ENST00000585309 91 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 282.8 ms