Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.56□□□□□ -2
HADHAP40939 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.56□□□□□ -2
HADHAP40939 AC100830.2-201ENST00000581636 240 ntBASIC2.56□□□□□ -2
HADHAP40939 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.56□□□□□ -2
HADHAP40939 AC073869.6-201ENST00000640656 341 ntBASIC2.56□□□□□ -2
HADHAP40939 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HADHAP40939 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HADHAP40939 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HADHAP40939 RNU6-1090P-201ENST00000364065 94 ntBASIC2.55□□□□□ -2
HADHAP40939 RNU6-214P-201ENST00000384130 107 ntBASIC2.55□□□□□ -2
HADHAP40939 Y_RNA.530-201ENST00000384587 101 ntBASIC2.55□□□□□ -2
HADHAP40939 FCF1P9-201ENST00000412546 282 ntBASIC2.55□□□□□ -2
HADHAP40939 AF274854.1-201ENST00000413236 615 ntBASIC2.55□□□□□ -2
HADHAP40939 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.55□□□□□ -2
HADHAP40939 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.55□□□□□ -2
HADHAP40939 AC078809.1-201ENST00000427601 140 ntBASIC2.55□□□□□ -2
HADHAP40939 NDUFA5P4-201ENST00000436704 385 ntBASIC2.55□□□□□ -2
HADHAP40939 UBE2V1P8-201ENST00000437166 265 ntBASIC2.55□□□□□ -2
HADHAP40939 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.55□□□□□ -2
HADHAP40939 IFNA11P-201ENST00000446352 526 ntBASIC2.55□□□□□ -2
HADHAP40939 HMGN2P26-201ENST00000463169 339 ntBASIC2.55□□□□□ -2
HADHAP40939 AC090515.1-201ENST00000465295 476 ntBASIC2.55□□□□□ -2
HADHAP40939 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.55□□□□□ -2
HADHAP40939 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.55□□□□□ -2
HADHAP40939 AC103996.1-201ENST00000555468 102 ntBASIC2.55□□□□□ -2
HADHAP40939 AC093249.1-201ENST00000567049 203 ntBASIC2.55□□□□□ -2
HADHAP40939 MIR3136-201ENST00000583498 78 ntBASIC2.55□□□□□ -2
HADHAP40939 BNIP3P25-201ENST00000596023 559 ntBASIC2.55□□□□□ -2
HADHAP40939 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HADHAP40939 AC097372.5-201ENST00000623665 376 ntBASIC2.55□□□□□ -2
HADHAP40939 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.55□□□□□ -2
HADHAP40939 AC241585.2-209ENST00000638217 143 ntBASIC2.55□□□□□ -2
HADHAP40939 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HADHAP40939 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
HADHAP40939 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
HADHAP40939 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HADHAP40939 Y_RNA.40-201ENST00000362645 93 ntBASIC2.54□□□□□ -2
HADHAP40939 Y_RNA.89-201ENST00000363031 102 ntBASIC2.54□□□□□ -2
HADHAP40939 RNU6-128P-201ENST00000383976 107 ntBASIC2.54□□□□□ -2
HADHAP40939 RNU6-301P-201ENST00000384277 107 ntBASIC2.54□□□□□ -2
HADHAP40939 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
HADHAP40939 RN7SKP61-201ENST00000410642 295 ntBASIC2.54□□□□□ -2
HADHAP40939 EIF1P1-201ENST00000421436 341 ntBASIC2.54□□□□□ -2
HADHAP40939 UBE2V1P4-201ENST00000425374 344 ntBASIC2.54□□□□□ -2
HADHAP40939 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.54□□□□□ -2
HADHAP40939 RPS27P27-201ENST00000498779 255 ntBASIC2.54□□□□□ -2
HADHAP40939 AC114801.2-201ENST00000503825 781 ntBASIC2.54□□□□□ -2
HADHAP40939 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.54□□□□□ -2
HADHAP40939 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.54□□□□□ -2
HADHAP40939 MIR4435-1-201ENST00000582552 80 ntBASIC2.54□□□□□ -2
HADHAP40939 AC107304.1-201ENST00000604229 296 ntBASIC2.54□□□□□ -2
HADHAP40939 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.54□□□□□ -2
HADHAP40939 AC104237.2-201ENST00000612456 443 ntBASIC2.54□□□□□ -2
HADHAP40939 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.54□□□□□ -2
HADHAP40939 MIR3688-2-201ENST00000636963 87 ntBASIC2.54□□□□□ -2
HADHAP40939 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.54□□□□□ -2
HADHAP40939 AC092268.1-201ENST00000342691 405 ntBASIC2.53□□□□□ -2
HADHAP40939 SNORD113-7-201ENST00000363762 77 ntBASIC2.53□□□□□ -2
HADHAP40939 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
HADHAP40939 RNU6-1329P-201ENST00000365664 107 ntBASIC2.53□□□□□ -2
HADHAP40939 Y_RNA.453-201ENST00000384223 109 ntBASIC2.53□□□□□ -2
HADHAP40939 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
HADHAP40939 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
HADHAP40939 RN7SKP158-201ENST00000410453 326 ntBASIC2.53□□□□□ -2
HADHAP40939 AP000275.1-201ENST00000411943 390 ntBASIC2.53□□□□□ -2
HADHAP40939 CR769767.1-201ENST00000436337 346 ntBASIC2.53□□□□□ -2
HADHAP40939 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.53□□□□□ -2
HADHAP40939 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.53□□□□□ -2
HADHAP40939 RN7SL429P-201ENST00000479090 223 ntBASIC2.53□□□□□ -2
HADHAP40939 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.53□□□□□ -2
HADHAP40939 RN7SL489P-201ENST00000486185 223 ntBASIC2.53□□□□□ -2
HADHAP40939 RN7SL327P-201ENST00000488659 223 ntBASIC2.53□□□□□ -2
HADHAP40939 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.53□□□□□ -2
HADHAP40939 Y_RNA.665-201ENST00000516177 98 ntBASIC2.53□□□□□ -2
HADHAP40939 AP005597.4-201ENST00000526762 229 ntBASIC2.53□□□□□ -2
HADHAP40939 AP002770.2-201ENST00000543613 532 ntBASIC2.53□□□□□ -2
HADHAP40939 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
HADHAP40939 AP001836.1-201ENST00000604675 523 ntBASIC2.53□□□□□ -2
HADHAP40939 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
HADHAP40939 AL121757.2-201ENST00000611223 313 ntBASIC2.53□□□□□ -2
HADHAP40939 RN7SL853P-201ENST00000617250 223 ntBASIC2.53□□□□□ -2
HADHAP40939 IGHVIII-44-202ENST00000636235 289 ntBASIC2.53□□□□□ -2
HADHAP40939 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HADHAP40939 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HADHAP40939 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
HADHAP40939 Y_RNA.157-201ENST00000363638 102 ntBASIC2.52□□□□□ -2.01
HADHAP40939 RNU6-534P-201ENST00000364877 106 ntBASIC2.52□□□□□ -2.01
HADHAP40939 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
HADHAP40939 RNU6-43P-201ENST00000384302 107 ntBASIC2.52□□□□□ -2.01
HADHAP40939 ZNF885P-201ENST00000420174 1098 ntBASIC2.52□□□□□ -2.01
HADHAP40939 AL590556.1-201ENST00000423231 483 ntBASIC2.52□□□□□ -2.01
HADHAP40939 RPL23AP95-201ENST00000426806 265 ntBASIC2.52□□□□□ -2.01
HADHAP40939 U8.21-201ENST00000459536 136 ntBASIC2.52□□□□□ -2.01
HADHAP40939 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.52□□□□□ -2.01
HADHAP40939 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
HADHAP40939 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
HADHAP40939 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.52□□□□□ -2.01
HADHAP40939 AC018889.1-201ENST00000605372 397 ntBASIC2.52□□□□□ -2.01
HADHAP40939 U4.3-201ENST00000621047 82 ntBASIC2.52□□□□□ -2.01
HADHAP40939 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms