Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.19□□□□□ -2.22
COL18A1P39060 RPS27AP14-201ENST00000422868 454 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AL049829.1-201ENST00000465411 156 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AC119751.4-201ENST00000507498 357 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.19□□□□□ -2.22
COL18A1P39060 RNA5SP330-201ENST00000517096 96 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 RNU6-667P-201ENST00000517186 102 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 MTND4LP18-201ENST00000526864 291 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.19□□□□□ -2.22
COL18A1P39060 AC025678.1-201ENST00000567861 338 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AL022345.1-201ENST00000607292 135 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.19□□□□□ -2.22
COL18A1P39060 AC010487.4-201ENST00000637027 61 ntBASIC1.19□□□□□ -2.22
COL18A1P39060 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.18□□□□□ -2.22
COL18A1P39060 AL445523.1-201ENST00000451184 1362 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
COL18A1P39060 SNORD14B-201ENST00000364533 90 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 SNORA8-201ENST00000384574 139 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 MIR186-201ENST00000384988 86 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 MRPL42P2-201ENST00000403169 426 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 RNU2-23P-201ENST00000410545 195 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 RNU2-48P-201ENST00000410694 191 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 MTCO2P23-201ENST00000425216 680 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.18□□□□□ -2.22
COL18A1P39060 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 UBE2V1P12-201ENST00000503954 474 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 HSPE1P23-201ENST00000509838 286 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 AC022616.8-201ENST00000533569 253 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 PCMTD1P2-201ENST00000565017 355 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 MIR3198-2-201ENST00000577868 80 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 BNIP3P30-201ENST00000601184 574 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 AL590095.2-201ENST00000604136 117 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 RNU6-87P-201ENST00000607561 108 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 AC010608.3-201ENST00000625048 527 ntBASIC1.18□□□□□ -2.22
COL18A1P39060 AC018630.2-201ENST00000534866 2403 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 SNORD114-23-201ENST00000363536 72 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 RNU6-72P-201ENST00000384285 79 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 SNORD116-20-201ENST00000384529 92 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL18A1P39060 MTND1P12-201ENST00000455231 147 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 AC112204.1-201ENST00000502591 103 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
COL18A1P39060 AC008834.1-201ENST00000511612 175 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 CYCSP27-201ENST00000527643 293 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.17□□□□□ -2.22
COL18A1P39060 AC093249.1-201ENST00000567049 203 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 AL031281.1-201ENST00000604049 488 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 AP002360.4-201ENST00000606980 481 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
COL18A1P39060 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 AC007742.2-201ENST00000618226 398 ntBASIC1.17□□□□□ -2.22
COL18A1P39060 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
COL18A1P39060 RNU6-655P-201ENST00000362858 107 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL18A1P39060 BTF3L4P1-201ENST00000413813 468 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC092809.3-201ENST00000415453 231 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 RPL22P18-201ENST00000417197 377 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.16□□□□□ -2.22
COL18A1P39060 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 AP000797.1-201ENST00000478870 387 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 PTP4A1P4-201ENST00000512479 322 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 RN7SKP256-201ENST00000517201 314 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AP000763.2-201ENST00000540641 163 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.16□□□□□ -2.22
COL18A1P39060 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.16□□□□□ -2.22
COL18A1P39060 AL158032.1-201ENST00000605401 106 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC005014.3-201ENST00000605985 190 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC108747.1-201ENST00000609508 535 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC022306.3-201ENST00000619930 550 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 SNORD56.2-201ENST00000363242 71 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 MIR29B2-201ENST00000385055 81 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 MIR936-201ENST00000401264 98 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC114491.1-201ENST00000416095 246 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 EIF4EP2-201ENST00000422816 654 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 UBE2V1P4-201ENST00000425374 344 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AL354941.1-201ENST00000438600 464 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.16□□□□□ -2.22
COL18A1P39060 CR769776.1-201ENST00000441254 787 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC118469.1-201ENST00000442943 488 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AL357134.1-201ENST00000445848 426 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.16□□□□□ -2.22
COL18A1P39060 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 PRELID3BP1-201ENST00000457142 540 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 snoU13.14-201ENST00000459372 104 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 RNA5SP57-201ENST00000459463 123 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AP001025.1-201ENST00000486139 332 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC091951.3-201ENST00000504093 246 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 AC022616.6-201ENST00000520479 119 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AP003122.4-201ENST00000530980 758 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.16□□□□□ -2.22
COL18A1P39060 BNIP3P6-201ENST00000549284 499 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.16□□□□□ -2.22
COL18A1P39060 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.16□□□□□ -2.22
COL18A1P39060 AC090517.3-201ENST00000625170 141 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms