Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CR769776.1-201ENST00000441254 787 ntBASIC1.15□□□□□ -2.23
RPA3P35244 AL022238.1-201ENST00000442557 355 ntBASIC1.15□□□□□ -2.23
RPA3P35244 ART2BP-201ENST00000453501 499 ntBASIC1.15□□□□□ -2.23
RPA3P35244 AC010587.1-201ENST00000505809 469 ntBASIC1.15□□□□□ -2.23
RPA3P35244 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.15□□□□□ -2.23
RPA3P35244 AP003181.2-201ENST00000528941 181 ntBASIC1.15□□□□□ -2.23
RPA3P35244 TRAV32-201ENST00000553993 340 ntBASIC1.15□□□□□ -2.23
RPA3P35244 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.15□□□□□ -2.23
RPA3P35244 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPA3P35244 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.14□□□□□ -2.23
RPA3P35244 RNU4-15P-201ENST00000362613 141 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RNU6-527P-201ENST00000363425 104 ntBASIC1.14□□□□□ -2.23
RPA3P35244 SNORD32B-201ENST00000364460 84 ntBASIC1.14□□□□□ -2.23
RPA3P35244 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RNU6-533P-201ENST00000384144 107 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RNU6-1200P-201ENST00000384162 107 ntBASIC1.14□□□□□ -2.23
RPA3P35244 MTCYBP36-201ENST00000404146 440 ntBASIC1.14□□□□□ -2.23
RPA3P35244 OR6C66P-201ENST00000414917 930 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RPL21P111-201ENST00000418453 477 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.14□□□□□ -2.23
RPA3P35244 Z82205.1-201ENST00000428456 297 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.14□□□□□ -2.23
RPA3P35244 AL591043.1-201ENST00000432461 424 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC119618.1-201ENST00000434191 222 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AL135790.2-201ENST00000437701 267 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RPL31P58-201ENST00000469001 379 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC112204.1-201ENST00000502591 103 ntBASIC1.14□□□□□ -2.23
RPA3P35244 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.14□□□□□ -2.23
RPA3P35244 AC112206.4-201ENST00000515142 405 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RNA5SP445-201ENST00000515889 115 ntBASIC1.14□□□□□ -2.23
RPA3P35244 RNU6-902P-201ENST00000517212 91 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.14□□□□□ -2.23
RPA3P35244 MIR4498-201ENST00000577599 66 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC008521.1-201ENST00000587471 187 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.14□□□□□ -2.23
RPA3P35244 MIR8063-201ENST00000621930 81 ntBASIC1.14□□□□□ -2.23
RPA3P35244 AC233981.2-201ENST00000611524 1614 ntBASIC1.14□□□□□ -2.23
RPA3P35244 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
RPA3P35244 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPA3P35244 RNU5E-7P-201ENST00000365290 117 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC000111.3-201ENST00000433478 193 ntBASIC1.13□□□□□ -2.23
RPA3P35244 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.13□□□□□ -2.23
RPA3P35244 FTH1P25-201ENST00000447665 469 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC145146.1-201ENST00000496370 254 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
RPA3P35244 HMGN1P13-201ENST00000505795 138 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC097473.1-201ENST00000508142 408 ntBASIC1.13□□□□□ -2.23
RPA3P35244 MTND3P25-201ENST00000509243 135 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AF131216.2-201ENST00000512316 564 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.13□□□□□ -2.23
RPA3P35244 AC018889.1-201ENST00000605372 397 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC105129.3-201ENST00000605455 485 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AL359821.1-201ENST00000605519 182 ntBASIC1.13□□□□□ -2.23
RPA3P35244 AC104010.1-201ENST00000616889 150 ntBASIC1.13□□□□□ -2.23
RPA3P35244 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.12□□□□□ -2.23
RPA3P35244 SNORD1A-201ENST00000364968 72 ntBASIC1.12□□□□□ -2.23
RPA3P35244 RNU6-641P-201ENST00000384006 107 ntBASIC1.12□□□□□ -2.23
RPA3P35244 RNU6-1222P-201ENST00000384615 107 ntBASIC1.12□□□□□ -2.23
RPA3P35244 SNORD115.1-201ENST00000391109 76 ntBASIC1.12□□□□□ -2.23
RPA3P35244 RNU2-39P-201ENST00000410604 198 ntBASIC1.12□□□□□ -2.23
RPA3P35244 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.12□□□□□ -2.23
RPA3P35244 MTND4P20-201ENST00000424125 869 ntBASIC1.12□□□□□ -2.23
RPA3P35244 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RPA3P35244 RPS27P16-201ENST00000425758 201 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AC137499.1-201ENST00000427602 88 ntBASIC1.12□□□□□ -2.23
RPA3P35244 RNU1-131P-201ENST00000458943 161 ntBASIC1.12□□□□□ -2.23
RPA3P35244 Y_RNA.638-201ENST00000459374 113 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AC117522.1-201ENST00000509821 380 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AC073539.2-201ENST00000597113 165 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AL031281.1-201ENST00000604049 488 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AC016727.1-205ENST00000605437 569 ntBASIC1.12□□□□□ -2.23
RPA3P35244 AL359740.1-201ENST00000624340 592 ntBASIC1.12□□□□□ -2.23
RPA3P35244 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.12□□□□□ -2.23
RPA3P35244 AC006927.4-201ENST00000639187 543 ntBASIC1.12□□□□□ -2.23
RPA3P35244 ICE2P2-201ENST00000483823 2787 ntBASIC1.11□□□□□ -2.23
RPA3P35244 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPA3P35244 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.11□□□□□ -2.23
RPA3P35244 MIR340-201ENST00000362125 95 ntBASIC1.11□□□□□ -2.23
RPA3P35244 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
RPA3P35244 RNU6-1285P-201ENST00000363480 105 ntBASIC1.11□□□□□ -2.23
RPA3P35244 MIR513A1-201ENST00000385138 129 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.11□□□□□ -2.23
RPA3P35244 AL589872.1-201ENST00000426602 288 ntBASIC1.11□□□□□ -2.23
RPA3P35244 UBE2V1P8-201ENST00000437166 265 ntBASIC1.11□□□□□ -2.23
RPA3P35244 SNRPEP8-201ENST00000442866 260 ntBASIC1.11□□□□□ -2.23
RPA3P35244 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AL009048.1-201ENST00000450437 298 ntBASIC1.11□□□□□ -2.23
RPA3P35244 RPS27AP8-201ENST00000452665 445 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AL049829.1-201ENST00000465411 156 ntBASIC1.11□□□□□ -2.23
RPA3P35244 RPL26P26-201ENST00000480251 434 ntBASIC1.11□□□□□ -2.23
RPA3P35244 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.11□□□□□ -2.23
RPA3P35244 AC104806.1-201ENST00000508720 308 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.11□□□□□ -2.23
RPA3P35244 MTND3P5-201ENST00000512798 333 ntBASIC1.11□□□□□ -2.23
RPA3P35244 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.11□□□□□ -2.23
RPA3P35244 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.11□□□□□ -2.23
RPA3P35244 AC091489.2-201ENST00000566263 604 ntBASIC1.11□□□□□ -2.23
RPA3P35244 MIR5697-201ENST00000578045 78 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms