Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC124916.1-201ENST00000444020 547 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 SNORD19B-201ENST00000459623 84 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 MTND4P17-201ENST00000470444 350 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 AC027575.1-201ENST00000481064 460 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-1170P-201ENST00000515974 106 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-237P-201ENST00000515985 71 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU4-49P-201ENST00000516080 140 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-123P-201ENST00000516163 102 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC13P31276 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC13P31276 AC100830.2-201ENST00000581636 240 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC13P31276 AC016925.2-201ENST00000605108 242 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 AC012409.4-201ENST00000612923 249 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 U4atac.1-201ENST00000618345 95 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 7SK.10-201ENST00000621414 298 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 CDC27P3-201ENST00000635418 1910 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 Y_RNA.231-201ENST00000364358 102 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 SNORA33.2-201ENST00000365413 134 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 RNU6-898P-201ENST00000365627 104 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 Y_RNA.387-201ENST00000383918 102 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 RNU6-510P-201ENST00000391239 108 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 AL591416.1-201ENST00000404015 867 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 Y_RNA.605-201ENST00000410577 105 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 MTCYBP8-201ENST00000422855 651 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 HMGB1P18-201ENST00000438801 619 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 RPS15AP9-201ENST00000439856 381 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC016691.1-201ENST00000441321 413 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 GSTA11P-201ENST00000452866 669 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC13P31276 CACYBPP2-201ENST00000453625 678 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.7□□□□□ -1.98
HOXC13P31276 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC13P31276 Y_RNA.631-201ENST00000459607 101 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AL163540.1-201ENST00000485382 386 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.7□□□□□ -1.98
HOXC13P31276 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC13P31276 SCARNA24.1-201ENST00000516465 137 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC087241.2-201ENST00000535801 324 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC13P31276 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.7□□□□□ -1.98
HOXC13P31276 MIR4742-201ENST00000581069 85 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 SNRPGP17-201ENST00000603780 214 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 AC011373.1-201ENST00000607270 237 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.7□□□□□ -1.98
HOXC13P31276 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HOXC13P31276 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC13P31276 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HOXC13P31276 AC007336.1-201ENST00000576365 3828 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNU6-179P-201ENST00000363350 107 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 Y_RNA.315-201ENST00000365117 102 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNA5SP240-201ENST00000365355 128 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 SNORD42.2-201ENST00000365570 69 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 SNORA6-201ENST00000384033 151 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RN7SKP158-201ENST00000410453 326 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNA5SP111-201ENST00000411386 101 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RPLP0P7-201ENST00000416050 667 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC113618.1-201ENST00000416747 285 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC13P31276 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 AL160275.3-201ENST00000423876 471 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RPL30P4-201ENST00000429309 333 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 Z98742.2-201ENST00000431564 187 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXC13P31276 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 PPP1R2P5-201ENST00000457256 603 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNU6-261P-201ENST00000459506 102 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC073901.1-201ENST00000462471 408 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC116562.3-201ENST00000506136 177 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 Y_RNA.711-201ENST00000516993 102 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RNU6-1220P-201ENST00000517126 108 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 RN7SKP256-201ENST00000517201 314 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC068587.5-201ENST00000528506 175 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.69□□□□□ -1.98
HOXC13P31276 AC026464.5-201ENST00000562497 722 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 FRG2DP-202ENST00000566967 323 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.69□□□□□ -1.98
HOXC13P31276 MIR4524B-201ENST00000581569 115 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC098848.2-201ENST00000588023 330 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC078899.2-201ENST00000595282 212 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC084781.2-201ENST00000615568 161 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AL354950.2-201ENST00000617939 290 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AC009161.2-201ENST00000624626 138 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 AL078596.1-201ENST00000624856 447 ntBASIC2.69□□□□□ -1.98
HOXC13P31276 MTND4LP32-201ENST00000636111 270 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms