Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-1280P-201ENST00000365211 107 ntBASIC2.85□□□□□ -1.95
MMP3P08254 U8.9-201ENST00000365667 134 ntBASIC2.85□□□□□ -1.95
MMP3P08254 MIR517A-201ENST00000385001 87 ntBASIC2.85□□□□□ -1.95
MMP3P08254 AL030996.1-201ENST00000411430 235 ntBASIC2.85□□□□□ -1.95
MMP3P08254 ATG3P1-201ENST00000419507 911 ntBASIC2.85□□□□□ -1.95
MMP3P08254 MTND4P28-201ENST00000426217 387 ntBASIC2.85□□□□□ -1.95
MMP3P08254 MTND1P14-201ENST00000427400 950 ntBASIC2.85□□□□□ -1.95
MMP3P08254 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.85□□□□□ -1.95
MMP3P08254 USP9YP30-201ENST00000430729 455 ntBASIC2.85□□□□□ -1.95
MMP3P08254 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.85□□□□□ -1.95
MMP3P08254 SNORA43.2-201ENST00000516652 128 ntBASIC2.85□□□□□ -1.95
MMP3P08254 RNU6-1016P-201ENST00000516689 94 ntBASIC2.85□□□□□ -1.95
MMP3P08254 RNU1-54P-201ENST00000517181 120 ntBASIC2.85□□□□□ -1.95
MMP3P08254 AP004607.1-201ENST00000524456 203 ntBASIC2.85□□□□□ -1.95
MMP3P08254 IMMP1LP2-201ENST00000552954 492 ntBASIC2.85□□□□□ -1.95
MMP3P08254 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.85□□□□□ -1.95
MMP3P08254 MIR3976-201ENST00000606807 139 ntBASIC2.85□□□□□ -1.95
MMP3P08254 AC084781.2-201ENST00000615568 161 ntBASIC2.85□□□□□ -1.95
MMP3P08254 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
MMP3P08254 AC090574.1-201ENST00000623186 233 ntBASIC2.85□□□□□ -1.95
MMP3P08254 SCARNA4-202ENST00000625402 129 ntBASIC2.85□□□□□ -1.95
MMP3P08254 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
MMP3P08254 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
MMP3P08254 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
MMP3P08254 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.84□□□□□ -1.95
MMP3P08254 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.84□□□□□ -1.95
MMP3P08254 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.84□□□□□ -1.95
MMP3P08254 OR56A5-201ENST00000340110 738 ntBASIC2.84□□□□□ -1.95
MMP3P08254 Y_RNA.11-201ENST00000362375 109 ntBASIC2.84□□□□□ -1.95
MMP3P08254 SNORA14A-201ENST00000364773 135 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RNU6-336P-201ENST00000364891 107 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RNU6-790P-201ENST00000384479 105 ntBASIC2.84□□□□□ -1.95
MMP3P08254 SNORA3.2-201ENST00000408221 125 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.84□□□□□ -1.95
MMP3P08254 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.84□□□□□ -1.95
MMP3P08254 snoU13.26-201ENST00000459452 105 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RPL7P42-201ENST00000481005 679 ntBASIC2.84□□□□□ -1.95
MMP3P08254 MRPL42P6-201ENST00000486397 371 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RPL23AP49-201ENST00000492925 468 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AC116655.1-201ENST00000508324 901 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AC116337.1-201ENST00000509680 687 ntBASIC2.84□□□□□ -1.95
MMP3P08254 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.84□□□□□ -1.95
MMP3P08254 RNU6-377P-201ENST00000515965 102 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RNU6-237P-201ENST00000515985 71 ntBASIC2.84□□□□□ -1.95
MMP3P08254 RNU6-56P-201ENST00000516986 93 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AC009229.3-201ENST00000608056 282 ntBASIC2.84□□□□□ -1.95
MMP3P08254 AC019193.3-201ENST00000609144 554 ntBASIC2.84□□□□□ -1.95
MMP3P08254 MIR3199-2-201ENST00000636243 86 ntBASIC2.84□□□□□ -1.95
MMP3P08254 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
MMP3P08254 CDC27P3-201ENST00000635418 1910 ntBASIC2.83□□□□□ -1.96
MMP3P08254 KPNA2P1-201ENST00000458289 1591 ntBASIC2.83□□□□□ -1.96
MMP3P08254 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MMP3P08254 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MMP3P08254 SNORD116-20-201ENST00000384529 92 ntBASIC2.83□□□□□ -1.96
MMP3P08254 RNY4P36-201ENST00000391116 96 ntBASIC2.83□□□□□ -1.96
MMP3P08254 SNORA26.7-201ENST00000391288 122 ntBASIC2.83□□□□□ -1.96
MMP3P08254 Y_RNA.594-201ENST00000410373 140 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.83□□□□□ -1.96
MMP3P08254 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
MMP3P08254 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.83□□□□□ -1.96
MMP3P08254 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.83□□□□□ -1.96
MMP3P08254 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.83□□□□□ -1.96
MMP3P08254 MTCO3P10-201ENST00000455912 772 ntBASIC2.83□□□□□ -1.96
MMP3P08254 RNU7-23P-201ENST00000459465 62 ntBASIC2.83□□□□□ -1.96
MMP3P08254 HMGN1P13-201ENST00000505795 138 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AC026782.1-201ENST00000512952 449 ntBASIC2.83□□□□□ -1.96
MMP3P08254 Y_RNA.670-201ENST00000516255 105 ntBASIC2.83□□□□□ -1.96
MMP3P08254 Y_RNA.718-201ENST00000517110 102 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.83□□□□□ -1.96
MMP3P08254 NACAP3-201ENST00000552100 481 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AL356055.1-201ENST00000602528 446 ntBASIC2.83□□□□□ -1.96
MMP3P08254 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.83□□□□□ -1.96
MMP3P08254 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.83□□□□□ -1.96
MMP3P08254 AL669831.3-213ENST00000636676 183 ntBASIC2.83□□□□□ -1.96
MMP3P08254 U4.7-201ENST00000638126 106 ntBASIC2.83□□□□□ -1.96
MMP3P08254 MTND4P23-201ENST00000447723 1363 ntBASIC2.83□□□□□ -1.96
MMP3P08254 ZNF658B-202ENST00000615961 3375 ntBASIC2.83□□□□□ -1.96
MMP3P08254 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.82□□□□□ -1.96
MMP3P08254 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MMP3P08254 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.82□□□□□ -1.96
MMP3P08254 RNU6-527P-201ENST00000363425 104 ntBASIC2.82□□□□□ -1.96
MMP3P08254 RNU6-1188P-201ENST00000363795 107 ntBASIC2.82□□□□□ -1.96
MMP3P08254 Y_RNA.404-201ENST00000383978 102 ntBASIC2.82□□□□□ -1.96
MMP3P08254 Y_RNA.482-201ENST00000384377 111 ntBASIC2.82□□□□□ -1.96
MMP3P08254 MIR504-201ENST00000385065 83 ntBASIC2.82□□□□□ -1.96
MMP3P08254 Y_RNA.579-201ENST00000390939 94 ntBASIC2.82□□□□□ -1.96
MMP3P08254 MTCYBP4-201ENST00000401524 249 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AL133475.1-201ENST00000404414 305 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.82□□□□□ -1.96
MMP3P08254 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.82□□□□□ -1.96
MMP3P08254 MTND3P9-201ENST00000429526 346 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AL645568.3-201ENST00000433683 316 ntBASIC2.82□□□□□ -1.96
MMP3P08254 RPL21P2-201ENST00000440049 481 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AL161651.1-201ENST00000440882 223 ntBASIC2.82□□□□□ -1.96
MMP3P08254 PCMTD1P1-201ENST00000455560 355 ntBASIC2.82□□□□□ -1.96
MMP3P08254 RPL30P15-201ENST00000457129 321 ntBASIC2.82□□□□□ -1.96
MMP3P08254 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.82□□□□□ -1.96
MMP3P08254 RPL9P9-202ENST00000466501 579 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms