Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MRPL35P1-201ENST00000404272 572 ntBASIC0.72□□□□□ -2.29
CTSDP07339 MTATP6P20-201ENST00000414147 562 ntBASIC0.72□□□□□ -2.29
CTSDP07339 MTND4P20-201ENST00000424125 869 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.72□□□□□ -2.29
CTSDP07339 EEF1A1P39-201ENST00000440791 250 ntBASIC0.72□□□□□ -2.29
CTSDP07339 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
CTSDP07339 OR2AQ1P-201ENST00000451972 200 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.72□□□□□ -2.29
CTSDP07339 SNORA19.3-201ENST00000516165 130 ntBASIC0.72□□□□□ -2.29
CTSDP07339 SUMO2P18-201ENST00000518873 252 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC011979.2-201ENST00000527568 352 ntBASIC0.72□□□□□ -2.29
CTSDP07339 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.72□□□□□ -2.29
CTSDP07339 MIR4781-201ENST00000585250 76 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AL592221.1-201ENST00000605266 382 ntBASIC0.72□□□□□ -2.29
CTSDP07339 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.72□□□□□ -2.29
CTSDP07339 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CTSDP07339 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.71□□□□□ -2.3
CTSDP07339 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.71□□□□□ -2.3
CTSDP07339 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CTSDP07339 RNU6-384P-201ENST00000364900 104 ntBASIC0.71□□□□□ -2.3
CTSDP07339 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
CTSDP07339 RNU6-1065P-201ENST00000384513 106 ntBASIC0.71□□□□□ -2.3
CTSDP07339 RNU6-1179P-201ENST00000384667 107 ntBASIC0.71□□□□□ -2.3
CTSDP07339 RN7SKP61-201ENST00000410642 295 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.71□□□□□ -2.3
CTSDP07339 AC123900.1-201ENST00000420390 96 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.71□□□□□ -2.3
CTSDP07339 ISCA1P6-201ENST00000427740 390 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AC007969.2-201ENST00000441891 191 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AL358794.1-201ENST00000445689 381 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.71□□□□□ -2.3
CTSDP07339 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.71□□□□□ -2.3
CTSDP07339 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.71□□□□□ -2.3
CTSDP07339 AF131216.2-201ENST00000512316 564 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.71□□□□□ -2.3
CTSDP07339 RNU5F-2P-201ENST00000516066 82 ntBASIC0.71□□□□□ -2.3
CTSDP07339 SNORD60.2-201ENST00000516883 86 ntBASIC0.71□□□□□ -2.3
CTSDP07339 RNA5SP404-201ENST00000517118 132 ntBASIC0.71□□□□□ -2.3
CTSDP07339 CENPUP1-201ENST00000526649 1202 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.71□□□□□ -2.3
CTSDP07339 AC123904.2-201ENST00000548059 300 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AC015688.6-201ENST00000577737 104 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AC018889.1-201ENST00000605372 397 ntBASIC0.71□□□□□ -2.3
CTSDP07339 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CTSDP07339 RMST_7.1-201ENST00000621935 268 ntBASIC0.71□□□□□ -2.3
CTSDP07339 OR4G3P-201ENST00000633500 913 ntBASIC0.71□□□□□ -2.3
CTSDP07339 MTND5P35-201ENST00000557537 1720 ntBASIC0.71□□□□□ -2.3
CTSDP07339 AL445523.1-201ENST00000451184 1362 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC245060.5-201ENST00000610778 3293 ntBASIC0.7□□□□□ -2.3
CTSDP07339 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CTSDP07339 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CTSDP07339 RNU6-1080P-201ENST00000383982 107 ntBASIC0.7□□□□□ -2.3
CTSDP07339 RPL23AP32-201ENST00000395315 459 ntBASIC0.7□□□□□ -2.3
CTSDP07339 RAP1BP3-201ENST00000407180 549 ntBASIC0.7□□□□□ -2.3
CTSDP07339 MTND1P30-201ENST00000441241 901 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.7□□□□□ -2.3
CTSDP07339 AC134050.1-201ENST00000495088 933 ntBASIC0.7□□□□□ -2.3
CTSDP07339 ARL2BPP4-201ENST00000506854 471 ntBASIC0.7□□□□□ -2.3
CTSDP07339 MTCO3P9-201ENST00000506989 781 ntBASIC0.7□□□□□ -2.3
CTSDP07339 MIR449C-201ENST00000516047 92 ntBASIC0.7□□□□□ -2.3
CTSDP07339 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
CTSDP07339 RNA5SP437-201ENST00000517249 129 ntBASIC0.7□□□□□ -2.3
CTSDP07339 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC115990.1-201ENST00000526957 301 ntBASIC0.7□□□□□ -2.3
CTSDP07339 CBX3P8-201ENST00000532412 525 ntBASIC0.7□□□□□ -2.3
CTSDP07339 CYP3A52P-201ENST00000563326 91 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC136932.1-201ENST00000574771 208 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.7□□□□□ -2.3
CTSDP07339 AP003465.2-201ENST00000602571 373 ntBASIC0.7□□□□□ -2.3
CTSDP07339 DEFB131E-202ENST00000602581 683 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC069114.2-201ENST00000604699 304 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC090578.1-201ENST00000604955 591 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC004492.1-201ENST00000607036 742 ntBASIC0.7□□□□□ -2.3
CTSDP07339 AC026585.1-201ENST00000619582 524 ntBASIC0.7□□□□□ -2.3
CTSDP07339 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CTSDP07339 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.69□□□□□ -2.3
CTSDP07339 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CTSDP07339 Y_RNA.164-201ENST00000363709 102 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RNY4P16-201ENST00000364768 94 ntBASIC0.69□□□□□ -2.3
CTSDP07339 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
CTSDP07339 MIR548B-201ENST00000385247 97 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RNU2-7P-201ENST00000410794 178 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AL161935.2-201ENST00000414627 60 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AC019070.1-201ENST00000415008 1024 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RPS3AP37-201ENST00000419176 745 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AL353777.1-201ENST00000425552 326 ntBASIC0.69□□□□□ -2.3
CTSDP07339 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
CTSDP07339 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.69□□□□□ -2.3
CTSDP07339 AC103851.1-201ENST00000506833 274 ntBASIC0.69□□□□□ -2.3
CTSDP07339 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.69□□□□□ -2.3
CTSDP07339 RNU7-51P-201ENST00000516560 62 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RNA5SP481-201ENST00000516814 122 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RNA5SP102-201ENST00000516865 106 ntBASIC0.69□□□□□ -2.3
CTSDP07339 RNU6-201P-201ENST00000517100 61 ntBASIC0.69□□□□□ -2.3
CTSDP07339 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.69□□□□□ -2.3
CTSDP07339 MTATP6P15-201ENST00000527233 835 ntBASIC0.69□□□□□ -2.3
CTSDP07339 ADI1P3-201ENST00000549509 470 ntBASIC0.69□□□□□ -2.3
CTSDP07339 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms