Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
RTN3O95197 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
RTN3O95197 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.69□□□□□ -1.98
RTN3O95197 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RTN3O95197 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RTN3O95197 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTN3O95197 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTN3O95197 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RTN3O95197 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
RTN3O95197 SNORD73A-201ENST00000386062 65 ntBASIC2.69□□□□□ -1.98
RTN3O95197 SNORD115-47-201ENST00000391226 86 ntBASIC2.69□□□□□ -1.98
RTN3O95197 CBX3P9-201ENST00000402326 552 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AIMP1P2-201ENST00000425294 312 ntBASIC2.69□□□□□ -1.98
RTN3O95197 MRPS10P2-201ENST00000431226 381 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.69□□□□□ -1.98
RTN3O95197 AL359672.1-201ENST00000442302 409 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.69□□□□□ -1.98
RTN3O95197 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AP005902.1-201ENST00000521358 186 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AP005597.4-201ENST00000526762 229 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AC115990.1-201ENST00000526957 301 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AP000763.2-201ENST00000540641 163 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AC025423.5-201ENST00000550230 219 ntBASIC2.69□□□□□ -1.98
RTN3O95197 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.69□□□□□ -1.98
RTN3O95197 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.69□□□□□ -1.98
RTN3O95197 AC009314.1-201ENST00000603871 304 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AL670379.2-201ENST00000604983 252 ntBASIC2.69□□□□□ -1.98
RTN3O95197 RMST_3.1-201ENST00000611651 109 ntBASIC2.69□□□□□ -1.98
RTN3O95197 AC122108.2-201ENST00000611946 526 ntBASIC2.69□□□□□ -1.98
RTN3O95197 U4atac.1-201ENST00000618345 95 ntBASIC2.69□□□□□ -1.98
RTN3O95197 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
RTN3O95197 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RTN3O95197 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTN3O95197 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RTN3O95197 RNU4-82P-201ENST00000362443 140 ntBASIC2.68□□□□□ -1.98
RTN3O95197 RNU6-534P-201ENST00000364877 106 ntBASIC2.68□□□□□ -1.98
RTN3O95197 Y_RNA.295-201ENST00000364918 102 ntBASIC2.68□□□□□ -1.98
RTN3O95197 Y_RNA.505-201ENST00000384489 102 ntBASIC2.68□□□□□ -1.98
RTN3O95197 RNU6-692P-201ENST00000384496 107 ntBASIC2.68□□□□□ -1.98
RTN3O95197 Y_RNA.615-201ENST00000410769 117 ntBASIC2.68□□□□□ -1.98
RTN3O95197 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.68□□□□□ -1.98
RTN3O95197 EIF1P1-201ENST00000421436 341 ntBASIC2.68□□□□□ -1.98
RTN3O95197 SNAP23P1-201ENST00000433229 246 ntBASIC2.68□□□□□ -1.98
RTN3O95197 AL513328.1-201ENST00000446460 224 ntBASIC2.68□□□□□ -1.98
RTN3O95197 RPL30P1-201ENST00000488676 339 ntBASIC2.68□□□□□ -1.98
RTN3O95197 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.68□□□□□ -1.98
RTN3O95197 IGLV3-17-201ENST00000519099 244 ntBASIC2.68□□□□□ -1.98
RTN3O95197 CBX3P7-201ENST00000532876 502 ntBASIC2.68□□□□□ -1.98
RTN3O95197 AL355297.2-201ENST00000604792 129 ntBASIC2.68□□□□□ -1.98
RTN3O95197 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.68□□□□□ -1.98
RTN3O95197 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RTN3O95197 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTN3O95197 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.67□□□□□ -1.98
RTN3O95197 RNU6-1141P-201ENST00000364520 107 ntBASIC2.67□□□□□ -1.98
RTN3O95197 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
RTN3O95197 U3.13-201ENST00000364804 214 ntBASIC2.67□□□□□ -1.98
RTN3O95197 Y_RNA.373-201ENST00000365600 103 ntBASIC2.67□□□□□ -1.98
RTN3O95197 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
RTN3O95197 RNU6-214P-201ENST00000384130 107 ntBASIC2.67□□□□□ -1.98
RTN3O95197 RNA5SP118-201ENST00000410385 109 ntBASIC2.67□□□□□ -1.98
RTN3O95197 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.67□□□□□ -1.98
RTN3O95197 MTND1P4-201ENST00000435196 415 ntBASIC2.67□□□□□ -1.98
RTN3O95197 AC011352.1-201ENST00000512300 793 ntBASIC2.67□□□□□ -1.98
RTN3O95197 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.67□□□□□ -1.98
RTN3O95197 RN7SKP24-201ENST00000515888 284 ntBASIC2.67□□□□□ -1.98
RTN3O95197 RNU6-718P-201ENST00000516166 105 ntBASIC2.67□□□□□ -1.98
RTN3O95197 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.67□□□□□ -1.98
RTN3O95197 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.67□□□□□ -1.98
RTN3O95197 IMMP1LP2-201ENST00000552954 492 ntBASIC2.67□□□□□ -1.98
RTN3O95197 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.67□□□□□ -1.98
RTN3O95197 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.67□□□□□ -1.98
RTN3O95197 MIR4435-1-201ENST00000582552 80 ntBASIC2.67□□□□□ -1.98
RTN3O95197 MIR5092-201ENST00000583139 88 ntBASIC2.67□□□□□ -1.98
RTN3O95197 AL356157.2-201ENST00000605122 111 ntBASIC2.67□□□□□ -1.98
RTN3O95197 BNIP3P10-201ENST00000605360 577 ntBASIC2.67□□□□□ -1.98
RTN3O95197 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
RTN3O95197 AC243829.7-201ENST00000633081 225 ntBASIC2.67□□□□□ -1.98
RTN3O95197 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
RTN3O95197 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RTN3O95197 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.66□□□□□ -1.98
RTN3O95197 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RTN3O95197 RNU6-1285P-201ENST00000363480 105 ntBASIC2.66□□□□□ -1.98
RTN3O95197 RNU6-1329P-201ENST00000365664 107 ntBASIC2.66□□□□□ -1.98
RTN3O95197 MIR144-201ENST00000384886 86 ntBASIC2.66□□□□□ -1.98
RTN3O95197 RNU6-332P-201ENST00000391193 108 ntBASIC2.66□□□□□ -1.98
RTN3O95197 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.66□□□□□ -1.98
RTN3O95197 NDUFA5P4-201ENST00000436704 385 ntBASIC2.66□□□□□ -1.98
RTN3O95197 USP9YP8-201ENST00000441913 500 ntBASIC2.66□□□□□ -1.98
RTN3O95197 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.66□□□□□ -1.98
RTN3O95197 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.66□□□□□ -1.98
RTN3O95197 RNU6-1037P-201ENST00000459571 107 ntBASIC2.66□□□□□ -1.98
RTN3O95197 SRIP1-201ENST00000489235 288 ntBASIC2.66□□□□□ -1.98
RTN3O95197 AC008628.2-201ENST00000502605 298 ntBASIC2.66□□□□□ -1.98
RTN3O95197 RNA5SP320-201ENST00000516263 124 ntBASIC2.66□□□□□ -1.98
RTN3O95197 SNORA48.11-201ENST00000517015 89 ntBASIC2.66□□□□□ -1.98
RTN3O95197 RNU6-586P-201ENST00000517265 104 ntBASIC2.66□□□□□ -1.98
RTN3O95197 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
RTN3O95197 AC121758.2-201ENST00000553271 193 ntBASIC2.66□□□□□ -1.98
RTN3O95197 AC090517.3-201ENST00000625170 141 ntBASIC2.66□□□□□ -1.98
RTN3O95197 CTSLP2-204ENST00000629029 392 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms