Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC073910.1-201ENST00000445047 438 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AL606517.1-201ENST00000446914 387 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AL353718.1-201ENST00000451028 517 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
SSSCA1O60232 AC012414.2-201ENST00000559474 187 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 HMGN1P30-201ENST00000589286 268 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AL360219.1-201ENST00000610230 366 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 MIR1264-201ENST00000616374 69 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 PCMTD1P7-201ENST00000634506 357 ntBASIC0.02□□□□□ -2.41
SSSCA1O60232 AL589743.1-201ENST00000551932 2712 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 SNORD3E-201ENST00000362899 217 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 RNY1P8-201ENST00000383970 114 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 RNA5SP247-201ENST00000411181 105 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AC016831.2-201ENST00000417179 352 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AL590556.1-201ENST00000423231 483 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AL603825.1-201ENST00000438481 80 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 RNFT1P2-201ENST00000443064 757 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AL606662.1-201ENST00000445763 553 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AL031313.1-201ENST00000448435 256 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.01□□□□□ -2.41
SSSCA1O60232 RPS26P48-201ENST00000491713 339 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AC010587.2-201ENST00000511727 448 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
SSSCA1O60232 AC023538.1-201ENST00000534576 736 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.01□□□□□ -2.41
SSSCA1O60232 AL358072.1-201ENST00000604156 575 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AC092354.1-201ENST00000606057 376 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.01□□□□□ -2.41
SSSCA1O60232 SNORD3E-202ENST00000627253 216 ntBASIC0.01□□□□□ -2.41
SSSCA1O60232 Y_RNA.25-201ENST00000362528 102 ntBASIC0□□□□□ -2.41
SSSCA1O60232 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
SSSCA1O60232 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0□□□□□ -2.41
SSSCA1O60232 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 LARP1BP3-201ENST00000437229 869 ntBASIC0□□□□□ -2.41
SSSCA1O60232 DAP3P1-201ENST00000441522 278 ntBASIC0□□□□□ -2.41
SSSCA1O60232 TAF9P1-201ENST00000445421 515 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0□□□□□ -2.41
SSSCA1O60232 HGF-207ENST00000453018 721 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 MTND4P21-201ENST00000453886 1357 ntBASIC0□□□□□ -2.41
SSSCA1O60232 TAF9P2-201ENST00000454958 515 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 RNU7-34P-201ENST00000459394 64 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 AC091435.1-201ENST00000505442 584 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AC005741.1-201ENST00000511094 432 ntBASIC0□□□□□ -2.41
SSSCA1O60232 RNU6-237P-201ENST00000515985 71 ntBASIC0□□□□□ -2.41
SSSCA1O60232 SNORA62.5-201ENST00000516634 120 ntBASIC0□□□□□ -2.41
SSSCA1O60232 RNU6-1261P-201ENST00000517194 104 ntBASIC0□□□□□ -2.41
SSSCA1O60232 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0□□□□□ -2.41
SSSCA1O60232 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0□□□□□ -2.41
SSSCA1O60232 Z98751.3-201ENST00000604447 521 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AL162730.1-201ENST00000605734 292 ntBASIC0□□□□□ -2.41
SSSCA1O60232 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0□□□□□ -2.41
SSSCA1O60232 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
SSSCA1O60232 RNA5SP264-201ENST00000363115 107 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNORD51.1-201ENST00000365405 77 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNORD89-201ENST00000390981 114 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNORA40C-201ENST00000391285 128 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 RPL22P18-201ENST00000417197 377 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 MTND4P20-201ENST00000424125 869 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 FABP5P4-201ENST00000437203 171 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC069257.2-201ENST00000441819 155 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNRPEP8-201ENST00000442866 260 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNORA31.3-201ENST00000516029 96 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 RNU6-405P-201ENST00000516637 110 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 RNU6-467P-201ENST00000517027 110 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC091163.3-201ENST00000518269 1144 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AP003327.1-201ENST00000529684 127 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AL132657.2-201ENST00000564417 358 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC138915.2-201ENST00000569776 97 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 MIR4431-201ENST00000579990 94 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AL078603.1-201ENST00000603824 313 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC091805.2-201ENST00000603848 235 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AL356157.2-201ENST00000605122 111 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC006270.3-201ENST00000605967 1036 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 AC021506.2-201ENST00000612354 169 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.01□□□□□ -2.41
SSSCA1O60232 AL359757.2-201ENST00000624309 274 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 MIR924-201ENST00000638017 53 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 MTND5P16-201ENST00000460269 1703 ntBASIC-0.01□□□□□ -2.41
SSSCA1O60232 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 RNU6-353P-201ENST00000364266 108 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 RNU6-166P-201ENST00000384371 107 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 RNU6-950P-201ENST00000384651 107 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SSSCA1O60232 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
SSSCA1O60232 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.02□□□□□ -2.41
SSSCA1O60232 ARL5AP1-201ENST00000418991 388 ntBASIC-0.02□□□□□ -2.41
SSSCA1O60232 GTF2IP12-201ENST00000456547 356 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms