Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 RNU2-10P-201ENST00000516375 211 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 AC136628.3-201ENST00000521868 290 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 AL442163.3-201ENST00000554110 156 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 AL391813.2-201ENST00000609113 322 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 AC108747.1-201ENST00000609508 535 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.6□□□□□ -2.31
PDE6DO43924 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.6□□□□□ -2.31
PDE6DO43924 RNA5SP259-201ENST00000365541 109 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 MIR578-201ENST00000384828 96 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 AC114482.1-201ENST00000418010 247 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 AL591043.1-201ENST00000432461 424 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.59□□□□□ -2.31
PDE6DO43924 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.59□□□□□ -2.31
PDE6DO43924 PDCD5P2-201ENST00000507570 312 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 AC074344.1-201ENST00000512823 224 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 RNU1-41P-201ENST00000516161 162 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 RNU1-48P-201ENST00000516400 162 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 RNU6-548P-201ENST00000517083 115 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 AC068587.4-201ENST00000533893 186 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 AC023050.2-201ENST00000544968 387 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.59□□□□□ -2.31
PDE6DO43924 AC144521.1-201ENST00000607148 956 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
PDE6DO43924 MIR6857-201ENST00000613267 93 ntBASIC0.59□□□□□ -2.31
PDE6DO43924 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
PDE6DO43924 SNORD114-24-201ENST00000365029 72 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 RNU6-723P-201ENST00000383973 107 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 RNU6-142P-201ENST00000384019 107 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.58□□□□□ -2.32
PDE6DO43924 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 USP9YP14-201ENST00000430663 563 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.58□□□□□ -2.32
PDE6DO43924 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.58□□□□□ -2.32
PDE6DO43924 MTCYBP39-201ENST00000437562 491 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AC073910.1-201ENST00000445047 438 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.58□□□□□ -2.32
PDE6DO43924 RNU7-95P-201ENST00000459222 64 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.58□□□□□ -2.32
PDE6DO43924 AC013828.2-201ENST00000532487 235 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.58□□□□□ -2.32
PDE6DO43924 MIR4709-201ENST00000577272 72 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AC110760.3-201ENST00000598794 467 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AC092106.3-201ENST00000611308 722 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 AC126544.2-201ENST00000625174 749 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 SNORD98-201ENST00000636377 67 ntBASIC0.58□□□□□ -2.32
PDE6DO43924 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PDE6DO43924 SNORA63.3-201ENST00000362682 132 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 RNU6-457P-201ENST00000363999 107 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AL117342.1-201ENST00000404861 406 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.57□□□□□ -2.32
PDE6DO43924 GTF2IP13-201ENST00000438487 386 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 SNORD124-201ENST00000459577 104 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 TOMM22P6-201ENST00000465035 409 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.57□□□□□ -2.32
PDE6DO43924 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.57□□□□□ -2.32
PDE6DO43924 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.57□□□□□ -2.32
PDE6DO43924 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.57□□□□□ -2.32
PDE6DO43924 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.57□□□□□ -2.32
PDE6DO43924 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.57□□□□□ -2.32
PDE6DO43924 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 MIR3136-201ENST00000583498 78 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AC025811.1-201ENST00000604312 472 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AC105129.3-201ENST00000605455 485 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AC006386.1-201ENST00000619436 415 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 AC103706.2-201ENST00000638080 240 ntBASIC0.57□□□□□ -2.32
PDE6DO43924 RNU6-1123P-201ENST00000362347 106 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 RNU5E-7P-201ENST00000365290 117 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 SNORA4.2-201ENST00000365313 147 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 Y_RNA.472-201ENST00000384322 102 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 RNU6-298P-201ENST00000390888 96 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 MTCYBP2-201ENST00000407745 171 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AL031779.1-201ENST00000415663 330 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC063976.4-201ENST00000421971 163 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.56□□□□□ -2.32
PDE6DO43924 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.56□□□□□ -2.32
PDE6DO43924 AC016925.1-201ENST00000458303 298 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC010531.2-201ENST00000465012 153 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 TRBVA-201ENST00000498804 316 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC104806.1-201ENST00000508720 308 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.56□□□□□ -2.32
PDE6DO43924 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 RNA5SP168-201ENST00000516642 112 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC109446.1-201ENST00000566172 220 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 MTND4LP25-201ENST00000570218 163 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 SNORA59B-202ENST00000578183 701 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC008751.2-201ENST00000597885 980 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AC068620.3-201ENST00000602749 560 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AL158032.1-201ENST00000605401 106 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AL121895.2-201ENST00000619558 447 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AP002782.1-201ENST00000623107 614 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 AL356596.1-201ENST00000624230 379 ntBASIC0.56□□□□□ -2.32
PDE6DO43924 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
PDE6DO43924 Y_RNA.46-201ENST00000362695 102 ntBASIC0.55□□□□□ -2.32
PDE6DO43924 RNU6-527P-201ENST00000363425 104 ntBASIC0.55□□□□□ -2.32
PDE6DO43924 SNORD31B-201ENST00000364977 69 ntBASIC0.55□□□□□ -2.32
PDE6DO43924 RNU11-5P-201ENST00000391216 129 ntBASIC0.55□□□□□ -2.32
PDE6DO43924 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms