Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN4O14493 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.35□□□□□ -2.03
CLDN4O14493 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLDN4O14493 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN4O14493 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN4O14493 Y_RNA.6-201ENST00000362350 114 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 Y_RNA.167-201ENST00000363735 109 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 RNU6-1210P-201ENST00000363775 107 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN4O14493 RNU6-1222P-201ENST00000384615 107 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CLDN4O14493 MIR548F1-201ENST00000408667 84 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AF274854.1-201ENST00000413236 615 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN4O14493 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN4O14493 RPS12P2-201ENST00000439728 269 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN4O14493 CYP2C59P-201ENST00000457790 269 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 RNA5SP320-201ENST00000516263 124 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.34□□□□□ -2.03
CLDN4O14493 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.34□□□□□ -2.03
CLDN4O14493 IGLV3-17-201ENST00000519099 244 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC087854.1-201ENST00000519706 414 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC121758.2-201ENST00000553271 193 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN4O14493 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN4O14493 MIR4524B-201ENST00000581569 115 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 MIR5692C1-201ENST00000585309 91 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AL159153.1-201ENST00000619688 317 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC098679.4-201ENST00000624241 654 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC090517.3-201ENST00000625170 141 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 AC073869.6-201ENST00000640656 341 ntBASIC2.34□□□□□ -2.03
CLDN4O14493 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.34□□□□□ -2.04
CLDN4O14493 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CLDN4O14493 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN4O14493 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CLDN4O14493 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CLDN4O14493 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CLDN4O14493 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN4O14493 RNA5SP240-201ENST00000365355 128 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 SNORD115-47-201ENST00000391226 86 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 EIF4E2P1-201ENST00000393781 255 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 RPS29P13-201ENST00000402041 169 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 RNU4-26P-201ENST00000410270 107 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 Y_RNA.615-201ENST00000410769 117 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN4O14493 AIMP1P2-201ENST00000425294 312 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 MRPS10P2-201ENST00000431226 381 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN4O14493 AL161788.1-201ENST00000441805 169 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 snoU13.14-201ENST00000459372 104 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN4O14493 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN4O14493 AP005902.1-201ENST00000521358 186 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AP005597.4-201ENST00000526762 229 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AP000763.2-201ENST00000540641 163 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN4O14493 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN4O14493 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN4O14493 AC060766.3-201ENST00000591442 263 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 BNIP3P25-201ENST00000596023 559 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AL670379.2-201ENST00000604983 252 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 AC024614.3-201ENST00000637860 256 ntBASIC2.33□□□□□ -2.04
CLDN4O14493 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN4O14493 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN4O14493 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN4O14493 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN4O14493 AC027514.1-201ENST00000588561 1603 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN4O14493 U8.2-201ENST00000363156 134 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 Y_RNA.256-201ENST00000364594 104 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 Y_RNA.373-201ENST00000365600 103 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 SNORA41-201ENST00000384675 132 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 RNU6-1106P-201ENST00000390845 107 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 AL359511.1-201ENST00000402970 211 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 Y_RNA.638-201ENST00000459374 113 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN4O14493 AC082651.2-201ENST00000496833 166 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN4O14493 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN4O14493 RNU6-718P-201ENST00000516166 105 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 Y_RNA.665-201ENST00000516177 98 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 AC104576.1-201ENST00000524225 88 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN4O14493 RMST_3.1-201ENST00000611651 109 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 AC008121.3-201ENST00000618726 433 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
CLDN4O14493 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN4O14493 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.31□□□□□ -2.04
CLDN4O14493 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CLDN4O14493 AC121333.1-201ENST00000567488 2709 ntBASIC2.31□□□□□ -2.04
CLDN4O14493 Y_RNA.89-201ENST00000363031 102 ntBASIC2.31□□□□□ -2.04
CLDN4O14493 SNORD114-30-201ENST00000364448 72 ntBASIC2.31□□□□□ -2.04
CLDN4O14493 DEFA7P-201ENST00000382676 285 ntBASIC2.31□□□□□ -2.04
CLDN4O14493 RNU6-877P-201ENST00000383868 107 ntBASIC2.31□□□□□ -2.04
CLDN4O14493 Y_RNA.453-201ENST00000384223 109 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms