Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AL359821.1-201ENST00000605519 182 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AP002360.4-201ENST00000606980 481 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC012409.4-201ENST00000612923 249 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AL359547.2-201ENST00000615810 418 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC097372.5-201ENST00000623665 376 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
SDCBPO00560 AC245060.5-201ENST00000610778 3293 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SDCBPO00560 RNU6-371P-201ENST00000364283 108 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SDCBPO00560 SNORA12.2-201ENST00000391040 156 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RPL23AP32-201ENST00000395315 459 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RAP1BP3-201ENST00000407180 549 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RPL37P10-201ENST00000412884 288 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AL161935.2-201ENST00000414627 60 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RPS15AP12-201ENST00000419498 388 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC139712.2-201ENST00000424302 339 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SDCBPO00560 AL589872.1-201ENST00000426602 288 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC245047.4-201ENST00000433189 144 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC099677.2-201ENST00000436385 175 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 HSPE1P9-201ENST00000440046 311 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RPS27AP8-201ENST00000452665 445 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 RNU1-131P-201ENST00000458943 161 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 HMGN1P13-201ENST00000505795 138 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC079140.2-201ENST00000506193 142 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 MTND2P33-201ENST00000506452 1031 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.77□□□□□ -2.29
SDCBPO00560 ATP5EP1-201ENST00000510257 156 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.77□□□□□ -2.29
SDCBPO00560 SNORA3.4-201ENST00000515969 96 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 MTATP6P15-201ENST00000527233 835 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AP000654.2-201ENST00000605633 586 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 U6.42-201ENST00000618440 107 ntBASIC0.77□□□□□ -2.29
SDCBPO00560 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.77□□□□□ -2.29
SDCBPO00560 RNU6-1285P-201ENST00000363480 105 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RNU4-1-201ENST00000363925 141 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RNU6-392P-201ENST00000364926 101 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RNU6-26P-201ENST00000383985 107 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RNU6-39P-201ENST00000384344 107 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 SNORA40.4-201ENST00000390971 128 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AL357139.1-201ENST00000407792 426 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.76□□□□□ -2.29
SDCBPO00560 MTND1P32-201ENST00000433043 938 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 FTH1P25-201ENST00000447665 469 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RPS27P1-201ENST00000450552 247 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RPS23P4-201ENST00000487908 423 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RBBP4P6-201ENST00000508098 202 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 RNA5SP337-201ENST00000517007 109 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.76□□□□□ -2.29
SDCBPO00560 ZNF519P3-201ENST00000557158 1032 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 CYP3A52P-201ENST00000563326 91 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 BNIP3P40-201ENST00000596017 556 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AL353778.1-201ENST00000603149 408 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AC018889.1-201ENST00000605372 397 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AC004808.1-201ENST00000627671 721 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.76□□□□□ -2.29
SDCBPO00560 AC013437.2-201ENST00000639587 677 ntBASIC0.76□□□□□ -2.29
SDCBPO00560 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SDCBPO00560 RNU1-22P-201ENST00000363334 158 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 RNU4-92P-201ENST00000363783 136 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 RNU4-68P-201ENST00000364314 141 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.75□□□□□ -2.29
SDCBPO00560 SNORA70.7-201ENST00000384159 133 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 MIR544A-201ENST00000384855 91 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC123900.1-201ENST00000420390 96 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.75□□□□□ -2.29
SDCBPO00560 AC000111.3-201ENST00000433478 193 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 SNRPEP8-201ENST00000442866 260 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 USP9YP17-201ENST00000444617 696 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 MTND1P12-201ENST00000455231 147 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.75□□□□□ -2.29
SDCBPO00560 AL049829.1-201ENST00000465411 156 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 HMGN2P9-201ENST00000476875 229 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AP000797.1-201ENST00000478870 387 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.75□□□□□ -2.29
SDCBPO00560 AC145146.1-201ENST00000496370 254 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.75□□□□□ -2.29
SDCBPO00560 AC104806.1-201ENST00000508720 308 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC108078.2-201ENST00000510750 236 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 MTCO3P28-201ENST00000513351 515 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 RNU6-237P-201ENST00000515985 71 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 RNU7-51P-201ENST00000516560 62 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 RNA5SP404-201ENST00000517118 132 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.75□□□□□ -2.29
SDCBPO00560 CENPUP1-201ENST00000526649 1202 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AP002453.2-201ENST00000533503 320 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.75□□□□□ -2.29
SDCBPO00560 AC015688.6-201ENST00000577737 104 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 SNORA59B-202ENST00000578183 701 ntBASIC0.75□□□□□ -2.29
SDCBPO00560 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.75□□□□□ -2.29
SDCBPO00560 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SDCBPO00560 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
SDCBPO00560 RNY4P24-201ENST00000362735 96 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 SNORD56.2-201ENST00000363242 71 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 RNU6-809P-201ENST00000384461 107 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 MRPL35P1-201ENST00000404272 572 ntBASIC0.74□□□□□ -2.29
SDCBPO00560 AC007283.2-201ENST00000424739 197 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms