Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL353706.1-201ENST00000436728 494 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 JTBP1-201ENST00000441314 247 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL606517.1-201ENST00000446914 387 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MTND2P33-201ENST00000506452 1031 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-64P-201ENST00000517119 105 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 BNIP3P39-201ENST00000601077 554 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL138889.2-201ENST00000603883 242 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL161798.1-201ENST00000604630 131 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC135507.1-201ENST00000607214 561 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MIR6134-201ENST00000617606 109 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC091931.1-201ENST00000623488 728 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU5F-6P-201ENST00000362979 116 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 U8.3-201ENST00000363321 132 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 SNORA23-201ENST00000365128 182 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-108P-201ENST00000365558 107 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-166P-201ENST00000384371 107 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-195P-201ENST00000411352 109 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL031779.1-201ENST00000415663 330 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC097463.2-201ENST00000421074 142 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 Z99497.1-201ENST00000421282 135 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC010153.1-201ENST00000432862 727 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL512844.2-201ENST00000433990 593 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 DDX3P2-201ENST00000446138 111 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RPL37P6-201ENST00000460682 294 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RPL31P58-201ENST00000469001 379 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 FO393415.2-201ENST00000480085 343 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 HMGB1P30-201ENST00000492455 606 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1092P-201ENST00000516955 87 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MIR3198-2-201ENST00000577868 80 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC005771.1-201ENST00000585581 349 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 AC008147.4-201ENST00000617570 1204 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 MIR6863-201ENST00000636112 90 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.85□□□□□ -2.27
COL6A6A6NMZ7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 MIR147B-201ENST00000390185 80 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU2-23P-201ENST00000410545 195 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 Y_RNA.608-201ENST00000410647 95 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RPS20P15-201ENST00000412792 311 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC016831.2-201ENST00000417179 352 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 MTND1P22-201ENST00000510572 951 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU6-1129P-201ENST00000515964 104 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU6-914P-201ENST00000516749 109 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU11-2P-201ENST00000516898 142 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU6-232P-201ENST00000517144 64 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC007363.1-201ENST00000604736 620 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AL138963.2-201ENST00000605137 226 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 BCRP9-201ENST00000605312 388 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AP003400.5-201ENST00000624827 617 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 MIR6086-201ENST00000638065 55 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 AC103706.2-201ENST00000638080 240 ntBASIC0.84□□□□□ -2.27
COL6A6A6NMZ7 RNU6-500P-201ENST00000362349 107 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU1-58P-201ENST00000362413 163 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU6-433P-201ENST00000363216 104 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU5F-7P-201ENST00000363696 115 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNY1P12-201ENST00000364251 105 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 SNORA62.1-201ENST00000364287 154 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.324-201ENST00000365165 102 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 SNORA4.3-201ENST00000365564 137 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU6-769P-201ENST00000384407 104 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RAP1BP3-201ENST00000407180 549 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.598-201ENST00000410480 95 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU6-293P-201ENST00000411259 106 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 MTND5P2-201ENST00000442927 1142 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AL441985.1-201ENST00000457727 251 ntBASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.84□□□□□ -2.28
COL6A6A6NMZ7 RNU6-685P-201ENST00000517088 95 ntBASIC0.84□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms