Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 Y_RNA.527-201ENST00000384573 102 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 RNU6-1105P-201ENST00000384774 107 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 UBA52P6-201ENST00000399822 382 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC007098.1-201ENST00000420122 367 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 SNORA59A-201ENST00000459326 152 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 RNU7-23P-201ENST00000459465 62 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 RPL30P10-201ENST00000488148 337 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC021146.2-201ENST00000504736 556 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC245166.1-201ENST00000521012 253 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC009163.5-201ENST00000575421 637 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AP000942.4-201ENST00000604811 241 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 SNORD58B-201ENST00000607313 66 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 AL138825.1-201ENST00000618587 192 ntBASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTPDC1A2A3K4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 SNORD56.1-201ENST00000362913 68 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 Y_RNA.133-201ENST00000363428 110 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 Y_RNA.455-201ENST00000384230 98 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AL353752.1-201ENST00000454946 260 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 S100A11P2-201ENST00000467589 312 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AP002884.2-201ENST00000471647 395 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 MED28P2-201ENST00000475771 317 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC097462.2-201ENST00000504623 481 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC104695.3-201ENST00000604052 296 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC019159.1-201ENST00000605094 187 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 MIR4272-201ENST00000635924 64 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 MIR3529-201ENST00000637713 78 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC009541.1-201ENST00000438279 2662 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 AC091812.1-201ENST00000432235 1948 ntBASIC3.64□□□□□ -1.83
PTPDC1A2A3K4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 RNU4-42P-201ENST00000364738 142 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 Y_RNA.485-201ENST00000384395 102 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 SNORA46-201ENST00000384762 135 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC007969.2-201ENST00000441891 191 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC112492.4-201ENST00000456549 352 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 RN7SKP210-201ENST00000459176 261 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 ACA59.2-201ENST00000517061 156 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC144568.1-201ENST00000520139 137 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AL590705.4-201ENST00000532209 134 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 HSBP1P1-201ENST00000555205 166 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AL117187.1-201ENST00000555482 181 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 MIR1244-1-201ENST00000612829 85 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 MIR1244-3-201ENST00000635744 85 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 MIR1244-2-201ENST00000636449 85 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 MIR1244-4-202ENST00000636813 85 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
PTPDC1A2A3K4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 MTCYBP2-201ENST00000407745 171 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC023141.4-201ENST00000412031 328 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC092423.1-201ENST00000430165 186 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 RPS15AP5-201ENST00000436276 388 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AL161651.1-201ENST00000440882 223 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AL031659.1-201ENST00000447075 539 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AL513124.1-201ENST00000450410 614 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AP001486.1-201ENST00000463339 476 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC008885.1-201ENST00000514930 301 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 SNORA31.1-201ENST00000515993 133 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 SNORA31.5-201ENST00000516190 133 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 SNORA31.23-201ENST00000517219 133 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC093331.1-201ENST00000521474 169 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC022080.3-201ENST00000544433 482 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AC060766.3-201ENST00000591442 263 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 7SK.7-201ENST00000603504 247 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 AL356157.2-201ENST00000605122 111 ntBASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.62□□□□□ -1.83
PTPDC1A2A3K4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms