Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNA5SP384-201ENST00000516615 116 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC136628.3-201ENST00000521868 290 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AL451064.1-201ENST00000607718 471 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 AC024940.5-201ENST00000622889 474 ntBASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.54□□□□□ -2.32
TRAV27A0A087WT01 RNU6-190P-201ENST00000384154 102 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 RNU6-17P-201ENST00000384245 107 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 RNU6-18P-201ENST00000384527 107 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 MIR194-1-201ENST00000384892 85 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC123900.1-201ENST00000420390 96 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AL627311.1-201ENST00000431514 115 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 MTND4P15-201ENST00000437913 1033 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 MTND1P30-201ENST00000441241 901 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 RNU5F-2P-201ENST00000516066 82 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC004817.2-201ENST00000561794 651 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC133485.1-201ENST00000567176 124 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC138907.6-201ENST00000568401 126 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC091135.1-201ENST00000585943 307 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC083806.3-201ENST00000614016 455 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 AC092104.1-201ENST00000497346 1441 ntBASIC0.53□□□□□ -2.32
TRAV27A0A087WT01 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 MIR412-201ENST00000362142 91 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 SNORD32B-201ENST00000364460 84 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC010099.3-201ENST00000423896 409 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 SNRPEP8-201ENST00000442866 260 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 MTCO2P25-201ENST00000447065 681 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 ART2BP-201ENST00000453501 499 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC005741.1-201ENST00000511094 432 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 AC074344.1-201ENST00000512823 224 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 SNORA43.2-201ENST00000516652 128 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 RNA5SP481-201ENST00000516814 122 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 RNU6-1028P-201ENST00000517164 93 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 HSPE1P4-201ENST00000550617 308 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 CYP3A137P-201ENST00000562436 69 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 MIR3664-201ENST00000579074 99 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 FAM106DP-201ENST00000586416 501 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 MTCO2P2-201ENST00000591258 225 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 MIR3976-201ENST00000606807 139 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.52□□□□□ -2.33
TRAV27A0A087WT01 OR4G2P-201ENST00000328113 903 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 RNU6-224P-201ENST00000384055 107 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 MIR520E-201ENST00000384867 87 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 RPS3AP36-201ENST00000398190 775 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 BTF3L4P1-201ENST00000413813 468 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 MTND4P3-201ENST00000417829 541 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AL117351.1-201ENST00000438864 766 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC112206.3-201ENST00000514578 389 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 RNU6-197P-201ENST00000516680 100 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 SNORD60.2-201ENST00000516883 86 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AP003355.1-201ENST00000518956 587 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 BNIP3P6-201ENST00000549284 499 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 VN1R82P-201ENST00000601481 356 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 MTATP6P2-201ENST00000603319 678 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 AC245297.2-201ENST00000610119 565 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 SCARNA4-202ENST00000625402 129 ntBASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV27A0A087WT01 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 RNU6-862P-201ENST00000362804 105 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 SNORA63D-201ENST00000364359 132 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 RN7SKP266-201ENST00000410232 287 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 MTCO3P41-201ENST00000414801 328 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 USP9YP21-201ENST00000420603 432 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 snoU13.27-201ENST00000459278 104 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC079140.3-201ENST00000511111 550 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 MTCO3P28-201ENST00000513351 515 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 RNU6-322P-201ENST00000516010 103 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC136443.5-201ENST00000603741 370 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AL136363.2-201ENST00000604173 851 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AC107304.1-201ENST00000604229 296 ntBASIC0.5□□□□□ -2.33
TRAV27A0A087WT01 AL022154.1-201ENST00000604698 785 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms