Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC097372.5-201ENST00000623665 376 ntBASIC1.2□□□□□ -2.22
CHTOPQ9Y3Y2 AC068787.1-201ENST00000623908 691 ntBASIC1.2□□□□□ -2.22
CHTOPQ9Y3Y2 ZNF355P-201ENST00000427301 3216 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 RNU4-15P-201ENST00000362613 141 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 MIR513B-201ENST00000385136 84 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 MRPL42P2-201ENST00000403169 426 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 MTCYBP39-201ENST00000437562 491 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC069257.2-201ENST00000441819 155 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC108078.1-201ENST00000508073 725 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC087883.1-201ENST00000551882 391 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 MTND4P33-201ENST00000556706 766 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 VN1R80P-201ENST00000597126 338 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 AC099654.5-201ENST00000636479 350 ntBASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CHTOPQ9Y3Y2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6-1285P-201ENST00000363480 105 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 SNORA64-201ENST00000384674 134 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AL079342.1-201ENST00000401460 267 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 RN7SKP192-201ENST00000411291 327 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 RNA5SP508-201ENST00000411327 119 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AL135786.1-201ENST00000415892 214 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC114491.1-201ENST00000416095 246 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 Z98742.3-201ENST00000418637 326 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 SNX2P2-201ENST00000424553 323 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AL645568.3-201ENST00000433683 316 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 PGBD4P5-201ENST00000445958 426 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 Z73417.1-201ENST00000447373 778 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 USP9YP25-201ENST00000457708 443 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 SNRPGP7-201ENST00000469016 106 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC023790.1-201ENST00000482174 347 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AP005597.4-201ENST00000526762 229 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 MTND1P24-201ENST00000552175 861 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC110760.3-201ENST00000598794 467 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC013244.3-201ENST00000605614 388 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC068944.2-201ENST00000610373 403 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC131159.1-201ENST00000621854 213 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 AC006927.4-201ENST00000639187 543 ntBASIC1.18□□□□□ -2.22
CHTOPQ9Y3Y2 Y_RNA.97-201ENST00000363094 102 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 RNU4-28P-201ENST00000364739 141 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 SNORA32.2-201ENST00000384049 122 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6-83P-201ENST00000384568 112 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 SNORA3.2-201ENST00000408221 125 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6-387P-201ENST00000411331 105 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 MED13P1-201ENST00000428342 171 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 RN7SKP265-201ENST00000516448 223 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AL512310.1-201ENST00000548639 172 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AC091544.4-201ENST00000555268 342 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 ZNF519P3-201ENST00000557158 1032 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AC009063.1-201ENST00000563342 702 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AC109446.1-201ENST00000566172 220 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 AP005136.1-201ENST00000579765 429 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CHTOPQ9Y3Y2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 RNA5SP327-201ENST00000362494 101 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 RNU1-62P-201ENST00000362599 164 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 SNORD113-6-201ENST00000363345 75 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 RNU6-157P-201ENST00000383957 107 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 SNORA24.1-201ENST00000384401 135 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 RNU2-2P-201ENST00000410396 191 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 EEF1A1P40-201ENST00000412883 573 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 ELOCP4-201ENST00000420090 333 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 MTCO3P29-201ENST00000432119 779 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 AC007677.1-201ENST00000445757 515 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.16□□□□□ -2.22
CHTOPQ9Y3Y2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms