Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 CDC27P3-201ENST00000635418 1910 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC073544.1-201ENST00000600110 1595 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC093831.2-201ENST00000624393 3427 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 RNU4-79P-201ENST00000362764 141 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 Y_RNA.535-201ENST00000384612 99 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 FO393413.1-201ENST00000402892 195 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 U3.37-201ENST00000408528 213 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC074085.1-201ENST00000413598 418 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC096649.2-201ENST00000416186 393 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AL139396.1-201ENST00000421137 167 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 HMGN2P10-201ENST00000448085 265 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 snoU109.2-201ENST00000459316 135 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC130509.1-201ENST00000464158 433 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC096725.1-201ENST00000514266 313 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 HPRT1P3-201ENST00000539521 576 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 GLYCAM1-201ENST00000546596 285 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 NACAP3-201ENST00000552100 481 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC008121.1-201ENST00000603244 268 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC113139.1-201ENST00000605049 239 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC025754.2-201ENST00000606491 432 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 AC010378.1-201ENST00000619270 362 ntBASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.34□□□□□ -1.87
HDAC9Q9UKV0 ZNF658B-202ENST00000615961 3375 ntBASIC3.34□□□□□ -1.88
HDAC9Q9UKV0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 SNORD56.5-201ENST00000364281 72 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 SNORA68.1-201ENST00000364537 132 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 RNU6-482P-201ENST00000391068 107 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AL117339.3-201ENST00000418733 162 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 FABP5P14-201ENST00000437273 393 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AC107399.1-201ENST00000451226 265 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 RN7SKP24-201ENST00000515888 284 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.675-201ENST00000516389 149 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AC104576.1-201ENST00000524225 88 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AP000787.2-201ENST00000604432 568 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 AC016727.1-205ENST00000605437 569 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 SCARNA4-202ENST00000625402 129 ntBASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HDAC9Q9UKV0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RNU6-942P-201ENST00000363002 107 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RNY3P1-201ENST00000365085 102 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RNY3-201ENST00000365484 102 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 MIR512-1-201ENST00000384913 84 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RN7SKP58-201ENST00000411010 305 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC023141.4-201ENST00000412031 328 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AL645568.3-201ENST00000433683 316 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 BTF3P15-201ENST00000455606 336 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 RPS27P27-201ENST00000498779 255 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC096745.1-201ENST00000509945 370 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 MRPS36P2-201ENST00000512569 299 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 HSPE1P20-201ENST00000538133 289 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC021739.1-201ENST00000559631 174 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 AC022140.2-201ENST00000623500 188 ntBASIC3.32□□□□□ -1.88
HDAC9Q9UKV0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RNU6-694P-201ENST00000364071 147 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 SNORA51.4-201ENST00000364993 124 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RNU6-750P-201ENST00000390946 107 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 SNORA3.2-201ENST00000408221 125 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RN7SKP192-201ENST00000411291 327 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RPL37P10-201ENST00000412884 288 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 Y_RNA.635-201ENST00000459041 101 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RPS29P21-201ENST00000496272 170 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RPL39P5-202ENST00000512505 151 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 RNA5SP148-201ENST00000516527 94 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 AL121917.1-203ENST00000605534 577 ntBASIC3.31□□□□□ -1.88
HDAC9Q9UKV0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms