Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 AC026241.1-201ENST00000517873 2142 ntBASIC2.77□□□□□ -1.97
LIN7CQ9NUP9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 RNU6-1286P-201ENST00000383871 107 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 SNORA29-201ENST00000384183 140 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 DBIP2-201ENST00000419076 262 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AF228730.4-201ENST00000421457 183 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AL513124.1-201ENST00000450410 614 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 CYCSP35-201ENST00000451978 304 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 ELOCP24-201ENST00000456370 334 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC091179.1-201ENST00000461606 579 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 FCF1P8-201ENST00000510322 597 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 RN7SKP282-201ENST00000516824 299 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC068657.1-201ENST00000520807 306 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 MIR5696-201ENST00000578474 85 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC105245.1-201ENST00000581934 244 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 MIR3117-201ENST00000584034 78 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC005899.2-201ENST00000584353 90 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC069294.1-201ENST00000608397 350 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AL442067.2-201ENST00000614033 363 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC133104.2-201ENST00000615272 193 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 MIR6075-201ENST00000620782 95 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AC090574.1-201ENST00000623186 233 ntBASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.76□□□□□ -1.97
LIN7CQ9NUP9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MTND4P27-201ENST00000450813 1354 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNA5SP119-201ENST00000362715 117 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNU1-72P-201ENST00000362976 153 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNA5SP50-201ENST00000363731 107 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNU6-890P-201ENST00000384121 107 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MIR7-3-201ENST00000384898 110 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MIR627-201ENST00000384979 97 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.579-201ENST00000390939 94 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 SNORA26.3-201ENST00000391119 136 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 SNORA75.6-201ENST00000391318 127 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 CBX3P9-201ENST00000402326 552 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 U6atac.2-201ENST00000408644 118 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AL353997.1-201ENST00000432936 108 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AL353705.4-201ENST00000449661 238 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNU7-152P-201ENST00000458982 64 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 HMGB1P35-201ENST00000503360 598 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC022447.4-201ENST00000504053 364 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNU6-307P-201ENST00000516743 106 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 RNU6-56P-201ENST00000516986 93 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC245166.1-201ENST00000521012 253 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC021231.3-201ENST00000558497 370 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC027176.1-201ENST00000560204 514 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MIR5571-201ENST00000577998 113 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MIR4429-201ENST00000580105 73 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AL078605.1-201ENST00000603529 500 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AL034555.1-201ENST00000604816 211 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 AC005014.2-201ENST00000607795 599 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 MTND5P27-201ENST00000428871 1720 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 ZNF299P-201ENST00000406845 1804 ntBASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.75□□□□□ -1.97
LIN7CQ9NUP9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC073544.1-201ENST00000600110 1595 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 snoU2_19.1-201ENST00000362361 80 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.431-201ENST00000384086 102 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 Y_RNA.460-201ENST00000384255 102 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC096664.2-201ENST00000411843 406 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC243428.1-201ENST00000421099 264 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 UBBP3-201ENST00000445497 241 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC115115.1-201ENST00000449927 248 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AL353752.1-201ENST00000454946 260 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 RPL23AP75-201ENST00000491601 451 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC021146.2-201ENST00000504736 556 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 HMGN1P13-201ENST00000505795 138 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC093303.1-201ENST00000514549 295 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 RNU6-120P-201ENST00000516077 103 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC093249.1-201ENST00000567049 203 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 MIR4444-1-201ENST00000581696 74 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 MIR3136-201ENST00000583498 78 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 MIR4444-2-201ENST00000584390 74 ntBASIC2.74□□□□□ -1.97
LIN7CQ9NUP9 AC019176.2-201ENST00000611579 315 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 180.7 ms