Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RPS4XP22-201ENST00000480755 780 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC093663.1-201ENST00000497190 394 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC115990.1-201ENST00000526957 301 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 RPS15AP11-201ENST00000594193 385 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AL359198.2-201ENST00000611836 194 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AL162373.1-201ENST00000620433 407 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC022149.2-201ENST00000621061 203 ntBASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC113Q9H0I3 AL353743.1-202ENST00000431724 1695 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 RNU6-212P-201ENST00000362642 104 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 SNORA70.4-201ENST00000365509 134 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 CD24P4-201ENST00000382840 243 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC096644.2-201ENST00000429278 159 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AL353752.1-201ENST00000454946 260 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 RNU7-87P-201ENST00000459343 62 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 snoU13.22-201ENST00000459428 104 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 RPL23AP75-201ENST00000491601 451 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 MTND4LP22-201ENST00000508209 276 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 RNU4-77P-201ENST00000516692 156 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC091144.1-201ENST00000519573 138 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 IGHV3-76-201ENST00000522465 295 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AC104581.2-201ENST00000572227 430 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 MIR4680-201ENST00000580906 66 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 MIR3944-201ENST00000581277 108 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AL162730.1-201ENST00000605734 292 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 AL132822.1-201ENST00000617063 513 ntBASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC113Q9H0I3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC092268.1-201ENST00000342691 405 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.80-201ENST00000362996 102 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 SNORD46.1-201ENST00000364139 104 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RNY3P11-201ENST00000364153 102 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.389-201ENST00000383924 113 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 SNORA29-201ENST00000384183 140 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.485-201ENST00000384395 102 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RNVU1-14-201ENST00000384770 164 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 MIR628-201ENST00000385229 95 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 MIR190B-201ENST00000401119 79 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1140P-201ENST00000410517 106 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RN7SKP61-201ENST00000410642 295 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC113618.1-201ENST00000416747 285 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 MTCO3P29-201ENST00000432119 779 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 OR2AQ1P-201ENST00000451972 200 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 PRSS3P4-201ENST00000453323 162 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AP001324.2-201ENST00000461163 319 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RPL7P49-201ENST00000471402 708 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 HMGN1P10-201ENST00000474557 553 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC016256.1-201ENST00000547971 354 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 MIR3186-201ENST00000577404 85 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 RPL23AP78-201ENST00000599928 470 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 uc_338.14-201ENST00000613162 166 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 UCA1.1-201ENST00000620952 75 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC110079.1-202ENST00000635213 138 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC093908.1-201ENST00000623125 8092 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 AC091812.1-201ENST00000432235 1948 ntBASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC113Q9H0I3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RNA5SP72-201ENST00000364442 117 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RNU4-42P-201ENST00000364738 142 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 MIR34B-201ENST00000385076 84 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RNU6-101P-201ENST00000410323 104 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC009414.1-201ENST00000427200 443 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC009296.1-201ENST00000443146 155 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 RPL30P1-201ENST00000488676 339 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC074250.1-201ENST00000511117 192 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC093331.1-201ENST00000521474 169 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC021231.3-201ENST00000558497 370 ntBASIC3.76□□□□□ -1.81
CCDC113Q9H0I3 AC006600.1-201ENST00000572529 153 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms