Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-128P-201ENST00000383976 107 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 Y_RNA.414-201ENST00000384011 101 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-876P-201ENST00000391295 104 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 SNORD56-201ENST00000413522 71 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC138393.2-201ENST00000414742 246 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL513185.2-201ENST00000425543 193 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC063976.3-201ENST00000426849 329 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 MTND3P10-201ENST00000450967 341 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL441985.1-201ENST00000457727 251 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RNU7-66P-201ENST00000459469 62 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 SLC25A15P5-201ENST00000508033 253 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC114781.4-201ENST00000513707 639 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-581P-201ENST00000516214 105 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 ACA59.2-201ENST00000517061 156 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RN7SKP256-201ENST00000517201 314 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AP000763.2-201ENST00000540641 163 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC023824.2-201ENST00000566185 400 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC011712.1-201ENST00000588959 234 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC005261.5-201ENST00000596280 355 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-85P-201ENST00000605989 107 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL357078.3-201ENST00000607528 618 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL121757.2-201ENST00000611223 313 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL442067.2-201ENST00000614033 363 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC093913.1-201ENST00000614178 329 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AL136221.1-201ENST00000621449 509 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AC009033.1-201ENST00000624279 431 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 MIR3529-201ENST00000637713 78 ntBASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.2□□□□□ -2.06
CCDC28BQ9BUN5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AL109809.4-201ENST00000603520 2185 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-37P-201ENST00000362692 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-11P-201ENST00000364234 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 Y_RNA.279-201ENST00000364763 95 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-7-201ENST00000364784 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-8-201ENST00000365467 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-25P-201ENST00000383873 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-1-201ENST00000383898 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-48P-201ENST00000384161 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-36P-201ENST00000384172 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-1013P-201ENST00000384180 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-4P-201ENST00000384205 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-5P-201ENST00000384238 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-3P-201ENST00000384314 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-16P-201ENST00000384385 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-15P-201ENST00000384534 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-2-201ENST00000384627 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-29P-201ENST00000384637 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-9-201ENST00000384776 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-33P-201ENST00000384793 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNA5SP171-201ENST00000391071 115 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNA5SP338-201ENST00000410495 85 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RPL21P111-201ENST00000418453 477 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 MTCO3P46-201ENST00000425787 232 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC018634.1-201ENST00000437554 401 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AL359672.1-201ENST00000442302 409 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC013470.1-201ENST00000453438 462 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC025033.1-201ENST00000463883 194 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 MTCO2P30-201ENST00000503662 364 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 MTCYBP40-201ENST00000509390 1135 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC025465.4-201ENST00000513422 638 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC046134.1-201ENST00000514454 666 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 SNORA43.2-201ENST00000516652 128 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 SNORA20.3-201ENST00000516880 132 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-323P-201ENST00000521915 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC021269.2-201ENST00000532318 330 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC100830.2-201ENST00000581636 240 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 MIR3935-201ENST00000583472 104 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC006023.1-201ENST00000603944 259 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 CTHRC1P1-201ENST00000605383 469 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-6P-201ENST00000606623 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 RNU6-91P-201ENST00000607774 107 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AC012640.5-201ENST00000623897 319 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 U4.7-201ENST00000638126 106 ntBASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CCDC28BQ9BUN5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC28BQ9BUN5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
CCDC28BQ9BUN5 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms