Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC021739.1-201ENST00000559631 174 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.25□□□□□ -1.89
SMOQ99835 VN1R107P-201ENST00000601784 209 ntBASIC3.25□□□□□ -1.89
SMOQ99835 SNORD58B-201ENST00000607313 66 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AL162373.1-201ENST00000620433 407 ntBASIC3.25□□□□□ -1.89
SMOQ99835 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.25□□□□□ -1.89
SMOQ99835 SNORA50A-202ENST00000629536 136 ntBASIC3.25□□□□□ -1.89
SMOQ99835 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.25□□□□□ -1.89
SMOQ99835 AC241585.2-209ENST00000638217 143 ntBASIC3.25□□□□□ -1.89
SMOQ99835 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SMOQ99835 ZNF299P-201ENST00000406845 1804 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AC005592.1-201ENST00000566527 1640 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AC091812.1-201ENST00000432235 1948 ntBASIC3.25□□□□□ -1.89
SMOQ99835 AC110491.1-201ENST00000562191 2010 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SMOQ99835 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.24□□□□□ -1.89
SMOQ99835 Y_RNA.123-201ENST00000363338 102 ntBASIC3.24□□□□□ -1.89
SMOQ99835 Y_RNA.133-201ENST00000363428 110 ntBASIC3.24□□□□□ -1.89
SMOQ99835 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RNU6-595P-201ENST00000363944 107 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RNY3P11-201ENST00000364153 102 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RNU6-784P-201ENST00000384330 106 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RNU6-1105P-201ENST00000384774 107 ntBASIC3.24□□□□□ -1.89
SMOQ99835 RNU2-23P-201ENST00000410545 195 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.24□□□□□ -1.89
SMOQ99835 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
SMOQ99835 AC243964.1-201ENST00000441814 261 ntBASIC3.24□□□□□ -1.89
SMOQ99835 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.24□□□□□ -1.89
SMOQ99835 AL353752.1-201ENST00000454946 260 ntBASIC3.24□□□□□ -1.89
SMOQ99835 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
SMOQ99835 MRPL42P6-201ENST00000486397 371 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
SMOQ99835 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.24□□□□□ -1.89
SMOQ99835 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 MIR5701-3-201ENST00000578890 82 ntBASIC3.24□□□□□ -1.89
SMOQ99835 MIR5701-1-201ENST00000585138 82 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC104695.3-201ENST00000604052 296 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AL162274.2-201ENST00000614406 332 ntBASIC3.24□□□□□ -1.89
SMOQ99835 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.24□□□□□ -1.89
SMOQ99835 MIR5701-2-201ENST00000615634 82 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC068831.7-201ENST00000616954 363 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC008121.3-201ENST00000618726 433 ntBASIC3.24□□□□□ -1.89
SMOQ99835 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.24□□□□□ -1.89
SMOQ99835 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SMOQ99835 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SMOQ99835 MTND5P16-201ENST00000460269 1703 ntBASIC3.24□□□□□ -1.89
SMOQ99835 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.24□□□□□ -1.89
SMOQ99835 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SMOQ99835 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMOQ99835 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SMOQ99835 AC073325.2-201ENST00000339545 159 ntBASIC3.23□□□□□ -1.89
SMOQ99835 RNU6-1280P-201ENST00000365211 107 ntBASIC3.23□□□□□ -1.89
SMOQ99835 Z92545.1-201ENST00000411782 234 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AP000275.1-201ENST00000411943 390 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AC096644.2-201ENST00000429278 159 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.23□□□□□ -1.89
SMOQ99835 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AL714022.1-201ENST00000439897 151 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AC006026.2-201ENST00000457376 180 ntBASIC3.23□□□□□ -1.89
SMOQ99835 ADAM3A-203ENST00000461344 2157 ntBASIC3.23□□□□□ -1.89
SMOQ99835 RPS29P2-201ENST00000479278 136 ntBASIC3.23□□□□□ -1.89
SMOQ99835 RNU6-764P-201ENST00000516396 105 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AC023442.1-201ENST00000531247 422 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR3124-201ENST00000582636 67 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR1244-1-201ENST00000612829 85 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AC110774.1-201ENST00000623567 2018 ntBASIC3.23□□□□□ -1.89
SMOQ99835 AL606534.2-204ENST00000635008 178 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR1244-3-201ENST00000635744 85 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR1244-2-201ENST00000636449 85 ntBASIC3.23□□□□□ -1.89
SMOQ99835 MIR1244-4-202ENST00000636813 85 ntBASIC3.23□□□□□ -1.89
SMOQ99835 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
SMOQ99835 ZNF72P-201ENST00000425869 1908 ntBASIC3.23□□□□□ -1.89
SMOQ99835 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.22□□□□□ -1.89
SMOQ99835 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.22□□□□□ -1.89
SMOQ99835 MIR22-201ENST00000362190 85 ntBASIC3.22□□□□□ -1.89
SMOQ99835 RNU6-858P-201ENST00000362436 107 ntBASIC3.22□□□□□ -1.89
SMOQ99835 RNU6-1309P-201ENST00000363305 108 ntBASIC3.22□□□□□ -1.89
SMOQ99835 NDUFB4P4-201ENST00000404822 243 ntBASIC3.22□□□□□ -1.89
SMOQ99835 Y_RNA.605-201ENST00000410577 105 ntBASIC3.22□□□□□ -1.89
SMOQ99835 AC023141.4-201ENST00000412031 328 ntBASIC3.22□□□□□ -1.89
SMOQ99835 AL591043.1-201ENST00000432461 424 ntBASIC3.22□□□□□ -1.89
SMOQ99835 MTATP8P1-201ENST00000467115 207 ntBASIC3.22□□□□□ -1.89
SMOQ99835 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.22□□□□□ -1.89
SMOQ99835 AC009812.2-201ENST00000517657 457 ntBASIC3.22□□□□□ -1.89
SMOQ99835 AC093331.1-201ENST00000521474 169 ntBASIC3.22□□□□□ -1.89
SMOQ99835 GNAI2P1-201ENST00000541815 315 ntBASIC3.22□□□□□ -1.89
SMOQ99835 AC006199.1-201ENST00000548728 219 ntBASIC3.22□□□□□ -1.89
SMOQ99835 CR383656.8-201ENST00000549046 145 ntBASIC3.22□□□□□ -1.89
SMOQ99835 AC004584.2-201ENST00000570407 410 ntBASIC3.22□□□□□ -1.89
SMOQ99835 MIR4272-201ENST00000635924 64 ntBASIC3.22□□□□□ -1.89
SMOQ99835 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SMOQ99835 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
SMOQ99835 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
SMOQ99835 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms