Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC243972.3-201ENST00000539655 198 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC093249.1-201ENST00000567049 203 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC005668.1-201ENST00000571142 476 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AP001094.1-201ENST00000579805 193 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 MIR3136-201ENST00000583498 78 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AL138963.2-201ENST00000605137 226 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 AC092593.1-201ENST00000515413 1815 ntBASIC2.62□□□□□ -1.99
NR1H4Q96RI1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NR1H4Q96RI1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC009541.1-201ENST00000438279 2662 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC092268.1-201ENST00000342691 405 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 RNU6-767P-201ENST00000384132 107 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 MIR23B-201ENST00000384832 97 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 MT-TL1-201ENST00000386347 75 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 RNU6-1148P-201ENST00000410992 104 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 Z82209.1-201ENST00000422141 2135 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC078809.1-201ENST00000427601 140 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 MTND3P9-201ENST00000429526 346 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC006028.1-201ENST00000438379 402 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 RBMX2P4-201ENST00000441256 376 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 PPP1R2P5-201ENST00000457256 603 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 MIR4801-201ENST00000582704 82 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC018889.1-201ENST00000605372 397 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 AC006133.1-201ENST00000617106 264 ntBASIC2.61□□□□□ -1.99
NR1H4Q96RI1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
NR1H4Q96RI1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 SNORA67.1-201ENST00000364749 141 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RNU6-142P-201ENST00000384019 107 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 SNORA80E-201ENST00000384744 137 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MIR144-201ENST00000384886 86 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MIR521-1-201ENST00000384902 87 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RN7SKP61-201ENST00000410642 295 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MTND3P8-201ENST00000412909 339 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RPL21P111-201ENST00000418453 477 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC003685.2-201ENST00000422795 395 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AIMP1P2-201ENST00000425294 312 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MTCO3P46-201ENST00000425787 232 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RPS12P2-201ENST00000439728 269 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AL161788.1-201ENST00000441805 169 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC090515.1-201ENST00000465295 476 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC090096.1-201ENST00000489168 390 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC046134.1-201ENST00000514454 666 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 RNU6-586P-201ENST00000517265 104 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 MIR3158-1-201ENST00000583596 81 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 UBL5P2-201ENST00000583788 219 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AL713866.2-201ENST00000603579 219 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AL355297.2-201ENST00000604792 129 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 AC018692.3-201ENST00000623929 123 ntBASIC2.6□□□□□ -1.99
NR1H4Q96RI1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.6□□□□□ -1.99
NR1H4Q96RI1 SNORD32A-201ENST00000364805 84 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 SNORA9.2-201ENST00000365361 133 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RNU6-95P-201ENST00000384697 107 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 MIR29B2-201ENST00000385055 81 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 MIR670-201ENST00000390142 98 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RPL23AP95-201ENST00000426806 265 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AC236972.1-201ENST00000433225 199 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL031659.1-201ENST00000447075 539 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RNU7-187P-201ENST00000458985 68 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RNU6-329P-201ENST00000459618 107 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.59□□□□□ -1.99
NR1H4Q96RI1 MTCO2P30-201ENST00000503662 364 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 RNU6-566P-201ENST00000516790 107 ntBASIC2.59□□□□□ -1.99
NR1H4Q96RI1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms