Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.35□□□□□ -2.03
RTL3Q8N8U3 DUXAP9-208ENST00000622815 614 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AC012640.5-201ENST00000623897 319 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 AP003400.5-201ENST00000624827 617 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 SCARNA4-202ENST00000625402 129 ntBASIC2.35□□□□□ -2.03
RTL3Q8N8U3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 Y_RNA.167-201ENST00000363735 109 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 SNORD14B-201ENST00000364533 90 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 RNU6-116P-201ENST00000384042 109 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 RNU1-148P-201ENST00000384472 162 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 RPL30P16-201ENST00000419341 429 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AL365400.1-201ENST00000431854 640 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 HMGB1P31-201ENST00000437242 427 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 MTND3P16-201ENST00000452205 344 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 RPL7P43-201ENST00000478876 753 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 LRRC34P2-201ENST00000514850 553 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 MIR5692A1-201ENST00000580523 69 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 MIR5583-1-201ENST00000580941 59 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC060780.3-201ENST00000589464 80 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC073410.2-201ENST00000603240 332 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC021646.1-201ENST00000605469 484 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
RTL3Q8N8U3 uc_338.34-201ENST00000617467 174 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 MIR3662-201ENST00000637030 95 ntBASIC2.34□□□□□ -2.03
RTL3Q8N8U3 OR4G1P-203ENST00000641984 1631 ntBASIC2.34□□□□□ -2.04
RTL3Q8N8U3 RNU1-72P-201ENST00000362976 153 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 RNU6-82P-201ENST00000363970 107 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 Y_RNA.231-201ENST00000364358 102 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 RNU6-522P-201ENST00000364497 107 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 Y_RNA.390-201ENST00000383932 102 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 RNU6-843P-201ENST00000384454 104 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 MIR578-201ENST00000384828 96 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 SNORA16.2-201ENST00000390991 127 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL606923.1-201ENST00000406616 190 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 SNORD23.1-201ENST00000408212 104 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 SNORA11.2-201ENST00000408318 127 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 RPL31P58-201ENST00000469001 379 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC116353.2-201ENST00000505332 712 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC104136.1-201ENST00000512969 394 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL118558.2-201ENST00000556294 238 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 MYL12BP1-201ENST00000569826 507 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC010525.2-201ENST00000590920 195 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 RNU6-89P-201ENST00000606519 100 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AC006504.8-201ENST00000621046 635 ntBASIC2.33□□□□□ -2.04
RTL3Q8N8U3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RTL3Q8N8U3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 Y_RNA.157-201ENST00000363638 102 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RNU6-715P-201ENST00000365204 103 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RNU1-57P-201ENST00000384491 166 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RNU6-373P-201ENST00000411247 98 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 ERLEC1P1-201ENST00000433806 578 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 SCARNA18-201ENST00000459004 134 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 HMGN2P26-201ENST00000463169 339 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RPL23AP49-201ENST00000492925 468 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 MTCYBP18-201ENST00000501056 747 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RNU2-69P-201ENST00000516061 100 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RNU7-193P-201ENST00000516723 65 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AF235103.2-201ENST00000525753 346 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 CENPUP1-201ENST00000526649 1202 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 CYCSP26-201ENST00000534107 320 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC078814.3-201ENST00000553036 491 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 OR11H5P-201ENST00000554039 926 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC073539.2-201ENST00000597113 165 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RPL30P11-203ENST00000598995 310 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 RMST_4.1-201ENST00000616886 107 ntBASIC2.32□□□□□ -2.04
RTL3Q8N8U3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.32□□□□□ -2.04
RTL3Q8N8U3 AC099654.14-201ENST00000638599 341 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms