Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 SNORD46.1-201ENST00000364139 104 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 SNORA14A-201ENST00000364773 135 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 U8.8-201ENST00000365399 135 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 RNU6-1032P-201ENST00000384100 107 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 RNU6-198P-201ENST00000384258 104 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 MIR521-1-201ENST00000384902 87 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 MIR888-201ENST00000401186 77 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 RPL26P27-201ENST00000414397 437 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC011816.1-201ENST00000441346 546 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC013470.1-201ENST00000453438 462 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 BTF3P15-201ENST00000455606 336 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AL031183.1-201ENST00000457667 207 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 RN7SL807P-201ENST00000470923 297 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 FO393415.2-201ENST00000480085 343 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC006445.1-201ENST00000491925 405 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 U4.7-201ENST00000638126 106 ntBASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP4Q8N3C7 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 Y_RNA.459-201ENST00000384251 102 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 RNY1P14-201ENST00000384426 108 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 Y_RNA.496-201ENST00000384444 101 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC113618.1-201ENST00000416747 285 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AL714022.1-201ENST00000439897 151 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC098831.1-201ENST00000440661 216 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 RPL37P4-201ENST00000448908 268 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 U8.21-201ENST00000459536 136 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 RPS29P20-201ENST00000489592 171 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 SNORA25.10-201ENST00000515926 124 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 SNORD59.2-201ENST00000516873 68 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 RNU6-1137P-201ENST00000517073 99 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 SNORD116.3-201ENST00000517176 78 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AP005902.1-201ENST00000521358 186 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 DNAJC8P1-201ENST00000554535 372 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 SRGNP1-201ENST00000603392 451 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 MTND4LP5-201ENST00000605152 292 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 YPEL5P2-201ENST00000605553 359 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 SCARNA4-202ENST00000625402 129 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AL035425.3-201ENST00000564206 4996 ntBASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLIP4Q8N3C7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 RNU6-78P-201ENST00000362897 107 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC117470.1-201ENST00000381974 330 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 MIR518D-201ENST00000385014 87 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 MIR34B-201ENST00000385076 84 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 MRPL42P3-201ENST00000401492 326 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AL451074.5-201ENST00000415894 435 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 BX510359.1-201ENST00000456973 237 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 snoU13.22-201ENST00000459428 104 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 RPS29P2-201ENST00000479278 136 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC022447.4-201ENST00000504053 364 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 RNU6-826P-201ENST00000516827 104 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 RNU6-612P-201ENST00000516909 102 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 RN7SKP272-201ENST00000516988 232 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 AC023442.1-201ENST00000531247 422 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 CBX3P8-201ENST00000532412 525 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 MIR8076-201ENST00000611401 83 ntBASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.71□□□□□ -1.98
CLIP4Q8N3C7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
CLIP4Q8N3C7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.7□□□□□ -1.98
CLIP4Q8N3C7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLIP4Q8N3C7 MIR208A-201ENST00000362287 71 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms