Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 Z83843.1-201ENST00000604070 3685 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 MIR369-201ENST00000362155 70 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU6-1115P-201ENST00000362490 106 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU5B-2P-201ENST00000363036 113 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 SNORA36A-201ENST00000384221 132 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU6-1011P-201ENST00000384668 107 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 MIR218-1-201ENST00000384999 110 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 MIR559-201ENST00000385188 96 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNA5SP424-201ENST00000390988 115 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU6-700P-201ENST00000391043 107 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RPL21P65-201ENST00000406094 466 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 MTCYBP2-201ENST00000407745 171 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 U6atac.2-201ENST00000408644 118 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNA5SP494-201ENST00000410653 129 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RPL30P4-201ENST00000429309 333 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RPS12P18-201ENST00000442381 270 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RN7SL132P-201ENST00000478131 296 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RPL23AP75-201ENST00000491601 451 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU6-826P-201ENST00000516827 104 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC120057.2-201ENST00000571520 271 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RN7SL600P-201ENST00000581811 299 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC105245.1-201ENST00000581934 244 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 Z98751.3-201ENST00000604447 521 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AL590392.1-201ENST00000604960 446 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 AC137590.2-201ENST00000619709 240 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 MIR492-201ENST00000638676 116 ntBASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC28AQ8IWP9 RNU1-70P-201ENST00000362618 164 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 Y_RNA.395-201ENST00000383945 109 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MIR1302-11-201ENST00000408051 138 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MIR1302-9-201ENST00000408365 138 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MIR1302-10-201ENST00000408734 138 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AL354751.2-201ENST00000415471 210 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MTCYBP10-201ENST00000424905 650 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AF186996.7-201ENST00000492781 209 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC021146.2-201ENST00000504736 556 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 PARP1P2-201ENST00000556806 195 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MIR3616-201ENST00000584070 92 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 RPL30P11-203ENST00000598995 310 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AL670379.2-201ENST00000604983 252 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 MIR1302-2-201ENST00000607096 138 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC069294.1-201ENST00000608397 350 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC134503.1-201ENST00000633048 54 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 RLIMP1-201ENST00000339626 1680 ntBASIC2.84□□□□□ -1.95
CCDC28AQ8IWP9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
CCDC28AQ8IWP9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.84□□□□□ -1.96
CCDC28AQ8IWP9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 SNORD115-32-201ENST00000364079 82 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 Y_RNA.463-201ENST00000384271 102 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 Y_RNA.577-201ENST00000384794 101 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 SNORD88.1-201ENST00000408684 91 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 RN7SKP220-201ENST00000410611 288 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC012306.1-201ENST00000423267 114 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 RPL7P2-201ENST00000427639 268 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 snoU13.30-201ENST00000458951 104 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC080013.2-201ENST00000460866 323 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC073901.1-201ENST00000462471 408 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC087477.1-201ENST00000465747 340 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC140059.1-201ENST00000489238 361 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC023141.11-201ENST00000508864 202 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 RNU7-175P-201ENST00000515915 61 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 RNU6-120P-201ENST00000516077 103 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC025884.1-201ENST00000556034 378 ntBASIC2.83□□□□□ -1.96
CCDC28AQ8IWP9 AC004584.2-201ENST00000570407 410 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms