Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 RPS4XP22-201ENST00000480755 780 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC093663.1-201ENST00000497190 394 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC016632.1-201ENST00000503994 196 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 RNU6-1045P-201ENST00000516321 107 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC007375.1-201ENST00000554513 578 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC105137.2-201ENST00000569073 466 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 RPL23AP78-201ENST00000599928 470 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC096772.1-201ENST00000609146 564 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC007792.1-201ENST00000623023 402 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 SNORA43.4-201ENST00000629559 138 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ATP13A4Q4VNC1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.39-201ENST00000362620 98 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 RNU4-9P-201ENST00000364951 139 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.504-201ENST00000384481 104 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 SNORA48.8-201ENST00000391324 134 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 RPS29P4-201ENST00000414733 161 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC138623.1-201ENST00000418060 216 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AL358453.1-201ENST00000422522 250 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC092423.1-201ENST00000430165 186 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 HMGN2P31-201ENST00000432430 273 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 OSTCP8-201ENST00000445117 448 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AL353705.4-201ENST00000449661 238 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 FCF1P8-201ENST00000510322 597 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC016256.1-201ENST00000547971 354 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC104581.2-201ENST00000572227 430 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC012493.2-201ENST00000595083 291 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AL162713.1-201ENST00000604480 262 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MIR1244-1-201ENST00000612829 85 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 SNORA50A-202ENST00000629536 136 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MIR1244-3-201ENST00000635744 85 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MIR1244-2-201ENST00000636449 85 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 MIR1244-4-202ENST00000636813 85 ntBASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
ATP13A4Q4VNC1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AL049781.1-201ENST00000623195 3585 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC093010.3-201ENST00000570269 15214 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RNU1-75P-201ENST00000347264 129 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.158-201ENST00000363651 101 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RNU2-23P-201ENST00000410545 195 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC078809.1-201ENST00000427601 140 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC244670.1-201ENST00000436879 112 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RPS29P12-201ENST00000460178 152 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AP001324.2-201ENST00000461163 319 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC091153.1-201ENST00000466297 402 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RPL30P1-201ENST00000488676 339 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RPL23AP75-201ENST00000491601 451 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RNU7-175P-201ENST00000515915 61 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 RNU4-77P-201ENST00000516692 156 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 GNAI2P1-201ENST00000541815 315 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC006557.5-201ENST00000603126 811 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 AC116312.1-201ENST00000606841 314 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 uc_338.14-201ENST00000613162 166 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 SCARNA4-201ENST00000629045 128 ntBASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.45□□□□□ -1.86
ATP13A4Q4VNC1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AC092268.1-201ENST00000342691 405 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 RNU6-1010P-201ENST00000362757 107 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 Y_RNA.80-201ENST00000362996 102 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 SNORA29-201ENST00000384183 140 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 MIR7-3-201ENST00000384898 110 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 SNORA12.2-201ENST00000391040 156 ntBASIC3.44□□□□□ -1.86
ATP13A4Q4VNC1 AL358075.3-201ENST00000426289 226 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms