Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC103996.1-201ENST00000555468 102 ntBASIC2.73□□□□□ -1.97
USP41Q3LFD5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.73□□□□□ -1.97
USP41Q3LFD5 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.73□□□□□ -1.97
USP41Q3LFD5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.73□□□□□ -1.97
USP41Q3LFD5 AC064859.1-201ENST00000624741 174 ntBASIC2.73□□□□□ -1.97
USP41Q3LFD5 MIR3529-201ENST00000637713 78 ntBASIC2.73□□□□□ -1.97
USP41Q3LFD5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
USP41Q3LFD5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP41Q3LFD5 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 Y_RNA.303-201ENST00000364998 94 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP41Q3LFD5 RNU1-109P-201ENST00000383960 147 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 RNU6-1013P-201ENST00000384180 107 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 SNORA70B-201ENST00000384210 135 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 MTND4LP11-201ENST00000422184 280 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 AL591043.1-201ENST00000432461 424 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 IFNA20P-201ENST00000436840 528 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 MTND3P10-201ENST00000450967 341 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 SRIP1-201ENST00000489235 288 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AK3P2-201ENST00000507976 429 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 MTCYBP40-201ENST00000509390 1135 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 SNORA31.6-201ENST00000516241 130 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 RNU6-864P-201ENST00000516256 108 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 RNA5SP24-201ENST00000516478 95 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC118273.2-201ENST00000532092 465 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC010186.2-204ENST00000537668 439 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 GLYCAM1-201ENST00000546596 285 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC026464.5-201ENST00000562497 722 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 MIR3124-201ENST00000582636 67 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC005730.3-201ENST00000583067 366 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 MIR3672-201ENST00000584290 82 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AL356575.1-201ENST00000603008 283 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 ELOCP5-201ENST00000604924 333 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC019159.1-201ENST00000605094 187 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 AC138627.2-201ENST00000624202 601 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.72□□□□□ -1.97
USP41Q3LFD5 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
USP41Q3LFD5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.71□□□□□ -1.97
USP41Q3LFD5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 SNORA72.1-201ENST00000363485 129 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 Y_RNA.279-201ENST00000364763 95 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 RNU6-1329P-201ENST00000365664 107 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 RNU6-843P-201ENST00000384454 104 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 RNU6-1106P-201ENST00000390845 107 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AL513477.1-202ENST00000417061 214 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC074117.2-201ENST00000417130 397 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AL117339.3-201ENST00000418733 162 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 Z98742.2-201ENST00000431564 187 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 MRPL50P4-201ENST00000446432 475 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 PPP1R2P5-201ENST00000457256 603 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC092436.3-201ENST00000511788 257 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC026371.1-201ENST00000551867 419 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AL121579.1-201ENST00000555129 305 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 MIR4742-201ENST00000581069 85 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC064836.2-201ENST00000609491 462 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 MIR7515-201ENST00000637837 67 ntBASIC2.71□□□□□ -1.98
USP41Q3LFD5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP41Q3LFD5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.71□□□□□ -1.98
USP41Q3LFD5 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
USP41Q3LFD5 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 Y_RNA.88-201ENST00000363029 99 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 RNU6-128P-201ENST00000383976 107 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 MTND3P8-201ENST00000412909 339 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC098614.3-201ENST00000438957 440 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AL353572.1-201ENST00000442490 417 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 RNU6-329P-201ENST00000459618 107 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 SNORA31.23-201ENST00000517219 133 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 COPS8P3-201ENST00000526024 482 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 SCOCP1-201ENST00000554676 349 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
USP41Q3LFD5 AC021646.1-201ENST00000605469 484 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 AL138726.1-201ENST00000614873 333 ntBASIC2.7□□□□□ -1.98
USP41Q3LFD5 RNU6-845P-201ENST00000362578 103 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU6-105P-201ENST00000363909 104 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 SNORA68.1-201ENST00000364537 132 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU6-336P-201ENST00000364891 107 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNU6-1083P-201ENST00000384022 107 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 RNY3P14-201ENST00000384309 102 ntBASIC2.69□□□□□ -1.98
USP41Q3LFD5 MIR518C-201ENST00000384822 101 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms