Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 RBBP4P6-201ENST00000508098 202 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 RNU6-123P-201ENST00000516163 102 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC022616.3-201ENST00000523940 148 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 FAM92A1P1-201ENST00000528023 890 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC087683.1-201ENST00000591187 441 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 RPL30P11-203ENST00000598995 310 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AL096840.1-201ENST00000603287 93 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AL359999.1-201ENST00000604513 294 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC104073.3-201ENST00000610942 955 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 AC091304.9-201ENST00000612091 226 ntBASIC1.78□□□□□ -2.12
SF3A2Q15428 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
SF3A2Q15428 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
SF3A2Q15428 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SF3A2Q15428 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RNA5SP276-201ENST00000362580 94 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 SNORD114-19-201ENST00000363072 75 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 U8.3-201ENST00000363321 132 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 CISD1P1-201ENST00000393907 327 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RPS3AP36-201ENST00000398190 775 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RNU2-16P-201ENST00000410712 136 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RNU6-248P-201ENST00000410720 107 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RPS3AP3-201ENST00000411933 242 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC138623.1-201ENST00000418060 216 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.77□□□□□ -2.13
SF3A2Q15428 USP9YP14-201ENST00000430663 563 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.77□□□□□ -2.13
SF3A2Q15428 MTND1P27-201ENST00000451117 902 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AL033528.1-201ENST00000453780 140 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 TPT1P7-201ENST00000458300 517 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 snoU109.1-201ENST00000459339 135 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 Y_RNA.672-201ENST00000516289 104 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 RNA5SP137-201ENST00000516833 135 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 AC093249.1-201ENST00000567049 203 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.77□□□□□ -2.13
SF3A2Q15428 MIR4528-201ENST00000577763 90 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 MTND1P15-201ENST00000579262 949 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 MIR4287-201ENST00000579398 78 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 BNIP3P30-201ENST00000601184 574 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC078795.2-201ENST00000602835 1252 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AL121992.2-201ENST00000606262 256 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC006566.1-201ENST00000608943 513 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC096772.1-201ENST00000609146 564 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AL627230.6-201ENST00000611129 280 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC122108.2-201ENST00000611946 526 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AL133173.2-201ENST00000614270 90 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC008250.2-201ENST00000615261 205 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 AC008121.3-201ENST00000618726 433 ntBASIC1.77□□□□□ -2.13
SF3A2Q15428 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.77□□□□□ -2.13
SF3A2Q15428 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.76□□□□□ -2.13
SF3A2Q15428 Y_RNA.22-201ENST00000362492 102 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 U3.13-201ENST00000364804 214 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 RNU6-641P-201ENST00000384006 107 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 SNORA24.1-201ENST00000384401 135 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 MIR561-201ENST00000385216 97 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 Y_RNA.623-201ENST00000411128 95 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AP000275.1-201ENST00000411943 390 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC096920.1-201ENST00000423991 241 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 MTND6P13-201ENST00000443510 523 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC244505.5-201ENST00000443639 207 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SF3A2Q15428 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.76□□□□□ -2.13
SF3A2Q15428 HMGB1P35-201ENST00000503360 598 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.76□□□□□ -2.13
SF3A2Q15428 SCARNA24.1-201ENST00000516465 137 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 RNU6-405P-201ENST00000516637 110 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC034114.1-201ENST00000520293 285 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC022880.1-201ENST00000534017 973 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC137800.2-201ENST00000574375 120 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC073410.2-201ENST00000603240 332 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AL022154.1-201ENST00000604698 785 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC098614.4-201ENST00000607601 462 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 MIR6504-201ENST00000613520 61 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AP001506.1-201ENST00000615444 211 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC099842.1-201ENST00000619919 596 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.76□□□□□ -2.13
SF3A2Q15428 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.76□□□□□ -2.13
SF3A2Q15428 ZNF702P-202ENST00000434269 1966 ntBASIC1.76□□□□□ -2.13
SF3A2Q15428 AL354685.2-201ENST00000448218 1447 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms