Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
FOXF1Q12946 MIR126-201ENST00000362291 85 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 RNU6-1032P-201ENST00000384100 107 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 RNU6-1274P-201ENST00000384557 107 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 Y_RNA.595-201ENST00000410403 105 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 Y_RNA.598-201ENST00000410480 95 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 SRIP3-201ENST00000413200 219 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 BTF3L4P1-201ENST00000413813 468 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC013410.2-201ENST00000422627 201 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 UBE2V1P4-201ENST00000425374 344 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXF1Q12946 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.12□□□□□ -2.23
FOXF1Q12946 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXF1Q12946 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXF1Q12946 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXF1Q12946 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXF1Q12946 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
FOXF1Q12946 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.12□□□□□ -2.23
FOXF1Q12946 MTCYBP40-201ENST00000509390 1135 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 RNU6-123P-201ENST00000516163 102 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 Y_RNA.687-201ENST00000516558 91 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC022616.3-201ENST00000523940 148 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC022616.8-201ENST00000533569 253 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC084364.2-201ENST00000546924 395 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC009094.1-201ENST00000564443 426 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 SUB1P3-201ENST00000564581 315 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.12□□□□□ -2.23
FOXF1Q12946 MTCYBP33-201ENST00000575007 1130 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 MIR5692A1-201ENST00000580523 69 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AL022161.1-201ENST00000604390 213 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AC092354.1-201ENST00000606057 376 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.12□□□□□ -2.23
FOXF1Q12946 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
FOXF1Q12946 AC007792.1-201ENST00000623023 402 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 AL157786.1-207ENST00000627771 695 ntBASIC1.12□□□□□ -2.23
FOXF1Q12946 MTND4P4-201ENST00000439033 1366 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 Y_RNA.40-201ENST00000362645 93 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
FOXF1Q12946 SNORD116-20-201ENST00000384529 92 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 RNU6-1179P-201ENST00000384667 107 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
FOXF1Q12946 MIR1283-2-201ENST00000408621 87 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC009310.1-201ENST00000414414 451 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC114491.1-201ENST00000416095 246 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 HIGD1AP15-201ENST00000416198 280 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.11□□□□□ -2.23
FOXF1Q12946 AL593851.1-201ENST00000426171 157 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AL356583.2-201ENST00000426536 280 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 Z82205.1-201ENST00000428456 297 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC015922.2-201ENST00000435593 184 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AL121601.2-201ENST00000438019 707 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.11□□□□□ -2.23
FOXF1Q12946 AL163540.1-201ENST00000485382 386 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AF131216.2-201ENST00000512316 564 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.11□□□□□ -2.23
FOXF1Q12946 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.11□□□□□ -2.23
FOXF1Q12946 CYCSP27-201ENST00000527643 293 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.11□□□□□ -2.23
FOXF1Q12946 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.11□□□□□ -2.23
FOXF1Q12946 AC090616.2-202ENST00000584248 222 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC103810.8-201ENST00000607347 118 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC012360.2-201ENST00000609349 391 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 AC027807.2-201ENST00000616099 408 ntBASIC1.11□□□□□ -2.23
FOXF1Q12946 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
FOXF1Q12946 RNU6-179P-201ENST00000363350 107 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 RNY1P12-201ENST00000364251 105 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 RNU6-546P-201ENST00000383991 107 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 RNU6-955P-201ENST00000410497 104 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 RNU6-607P-201ENST00000411283 108 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
FOXF1Q12946 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXF1Q12946 AC007283.2-201ENST00000424739 197 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 CBX3P6-201ENST00000430257 527 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXF1Q12946 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.1□□□□□ -2.23
FOXF1Q12946 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXF1Q12946 AC007969.2-201ENST00000441891 191 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AC079781.2-201ENST00000446424 169 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.1□□□□□ -2.23
FOXF1Q12946 EPS15P1-201ENST00000448836 336 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 ZNF114P1-201ENST00000453500 292 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AC112492.4-201ENST00000456549 352 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXF1Q12946 RAP1BP2-201ENST00000478270 544 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 RPL30P1-201ENST00000488676 339 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 MTCO3P9-201ENST00000506989 781 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AC090572.1-201ENST00000519251 160 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.1□□□□□ -2.23
FOXF1Q12946 AC106038.2-201ENST00000520706 568 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.1□□□□□ -2.23
FOXF1Q12946 BNIP3P6-201ENST00000549284 499 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 MIR3682-201ENST00000581338 84 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AC073413.2-201ENST00000604332 360 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AL391262.2-201ENST00000622466 494 ntBASIC1.1□□□□□ -2.23
FOXF1Q12946 AC079248.2-201ENST00000623779 326 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms