Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC-1□□□□□ -2.57
RPL39P62891 AP000763.2-201ENST00000540641 163 ntBASIC-1□□□□□ -2.57
RPL39P62891 MIR4504-201ENST00000577413 92 ntBASIC-1□□□□□ -2.57
RPL39P62891 MIR3169-201ENST00000578032 83 ntBASIC-1□□□□□ -2.57
RPL39P62891 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1□□□□□ -2.57
RPL39P62891 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-1□□□□□ -2.57
RPL39P62891 AL133370.2-201ENST00000619934 439 ntBASIC-1□□□□□ -2.57
RPL39P62891 AC110491.1-201ENST00000562191 2010 ntBASIC-1□□□□□ -2.57
RPL39P62891 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
RPL39P62891 RNU6-674P-201ENST00000363831 107 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 SNORA75.3-201ENST00000391231 150 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL39P62891 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL39P62891 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPL39P62891 RNU6-1256P-201ENST00000516539 103 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 MIR5589-201ENST00000579442 60 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AC005261.5-201ENST00000596280 355 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AC146944.4-201ENST00000602697 718 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AC112220.2-201ENST00000605513 533 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AC011921.3-201ENST00000605540 361 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 AL359697.1-201ENST00000624879 587 ntBASIC-1.01□□□□□ -2.57
RPL39P62891 SNORA9.1-201ENST00000362412 131 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 Y_RNA.99-201ENST00000363138 105 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 MIR520A-201ENST00000384862 85 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
RPL39P62891 MIR1912-201ENST00000410389 80 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AL590632.1-201ENST00000424289 371 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-1.02□□□□□ -2.57
RPL39P62891 RPS29P15-201ENST00000458329 171 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 RNU7-56P-201ENST00000458744 62 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 RPL39P38-201ENST00000467018 153 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-1.02□□□□□ -2.57
RPL39P62891 MIR3666-201ENST00000607845 111 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 RN7SL660P-201ENST00000614852 299 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AL596245.1-201ENST00000618994 362 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AC017037.3-201ENST00000625016 472 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 AC119674.1-220ENST00000641502 1048 ntBASIC-1.02□□□□□ -2.57
RPL39P62891 RNU1-39P-201ENST00000383897 165 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 MT-TQ-201ENST00000387372 72 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 SNORD75.1-201ENST00000408373 60 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 RPL21P24-201ENST00000413752 448 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 BTF3L4P1-201ENST00000413813 468 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC-1.03□□□□□ -2.57
RPL39P62891 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC-1.03□□□□□ -2.57
RPL39P62891 HMGN2P26-201ENST00000463169 339 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 AC113398.2-201ENST00000507630 558 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 Y_RNA.696-201ENST00000516725 107 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 RNA5SP481-201ENST00000516814 122 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-1.03□□□□□ -2.57
RPL39P62891 AC012065.4-201ENST00000602445 679 ntBASIC-1.03□□□□□ -2.57
RPL39P62891 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.03□□□□□ -2.57
RPL39P62891 MTND4P4-201ENST00000439033 1366 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNA5SP325-201ENST00000363756 130 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNA5SP493-201ENST00000364115 91 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNU6-898P-201ENST00000365627 104 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 MIR135A2-201ENST00000384854 100 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 MTCO2P34-201ENST00000421994 607 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-1.04□□□□□ -2.58
RPL39P62891 RNU6-1095P-201ENST00000516148 108 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNA5SP437-201ENST00000517249 129 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-1.04□□□□□ -2.58
RPL39P62891 AC025423.2-201ENST00000537570 439 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
RPL39P62891 AC104985.3-201ENST00000623479 597 ntBASIC-1.04□□□□□ -2.58
RPL39P62891 RNA5SP259-201ENST00000365541 109 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 PRRC2CP1-201ENST00000404428 159 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AL139396.1-201ENST00000421137 167 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AL353706.1-201ENST00000436728 494 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-1.05□□□□□ -2.58
RPL39P62891 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-1.05□□□□□ -2.58
RPL39P62891 MTND1P9-201ENST00000453775 944 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 MTCO3P10-201ENST00000455912 772 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 RNU7-159P-201ENST00000459284 62 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC121161.1-201ENST00000510606 652 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 SNORA76.2-201ENST00000517095 137 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC109810.1-201ENST00000534066 224 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-1.05□□□□□ -2.58
RPL39P62891 ZNF519P3-201ENST00000557158 1032 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC122134.1-202ENST00000569111 1201 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 AC091152.3-201ENST00000604227 325 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 UBE2Q2P6-201ENST00000612666 153 ntBASIC-1.05□□□□□ -2.58
RPL39P62891 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
RPL39P62891 RNU6-884P-201ENST00000363889 107 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
RPL39P62891 RNU6-46P-201ENST00000383860 107 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 MIR892B-201ENST00000401279 77 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 ERHP2-201ENST00000402323 299 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 MTATP6P31-201ENST00000406985 692 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 RNA5SP504-201ENST00000410676 117 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-1.06□□□□□ -2.58
RPL39P62891 AL121578.1-201ENST00000428051 892 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-1.06□□□□□ -2.58
RPL39P62891 MTCYBP29-201ENST00000436327 1006 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC-1.06□□□□□ -2.58
RPL39P62891 Z82210.1-201ENST00000440037 231 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-1.06□□□□□ -2.58
RPL39P62891 RPL36AP48-201ENST00000485521 314 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 SNORA25.11-201ENST00000515935 105 ntBASIC-1.06□□□□□ -2.58
RPL39P62891 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms