Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC013262.1-201ENST00000426710 252 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AL591212.2-201ENST00000433923 257 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 LARP1BP3-201ENST00000437229 869 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 MTND4P15-201ENST00000437913 1033 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 FTH1P25-201ENST00000447665 469 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXA3P55318 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXA3P55318 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
FOXA3P55318 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.48□□□□□ -2.33
FOXA3P55318 AC093899.1-201ENST00000457984 376 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.48□□□□□ -2.33
FOXA3P55318 HMGN1P7-201ENST00000491722 313 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 SUMO2P5-201ENST00000506790 245 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 RNA5SP458-201ENST00000516188 119 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 RNU6-914P-201ENST00000516749 109 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 DEFB108E-201ENST00000524692 240 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AL157871.3-201ENST00000557231 293 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXA3P55318 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.48□□□□□ -2.33
FOXA3P55318 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.48□□□□□ -2.33
FOXA3P55318 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.48□□□□□ -2.33
FOXA3P55318 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC107304.1-201ENST00000604229 296 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AL359821.1-201ENST00000605519 182 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC022893.3-201ENST00000607665 437 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 AC007792.1-201ENST00000623023 402 ntBASIC0.48□□□□□ -2.33
FOXA3P55318 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXA3P55318 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
FOXA3P55318 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.48□□□□□ -2.33
FOXA3P55318 SNORA63D-201ENST00000364359 132 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 SNORD114-24-201ENST00000365029 72 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 SNORA18.2-201ENST00000383865 132 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 RNU6-224P-201ENST00000384055 107 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 AL117342.1-201ENST00000404861 406 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 Y_RNA.595-201ENST00000410403 105 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 AL365338.1-201ENST00000422282 858 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 GTF2IP13-201ENST00000438487 386 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 CALM1P1-201ENST00000442082 433 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 MTCO2P25-201ENST00000447065 681 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 MTCO1P27-201ENST00000448269 226 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.47□□□□□ -2.33
FOXA3P55318 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.47□□□□□ -2.33
FOXA3P55318 AC005741.1-201ENST00000511094 432 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 AC079140.3-201ENST00000511111 550 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 RNU6-113P-201ENST00000516653 101 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 SNORA70.22-201ENST00000517160 124 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 MIR1273C-201ENST00000578669 77 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.47□□□□□ -2.33
FOXA3P55318 AL133216.2-202ENST00000634512 349 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 MTND5P42-201ENST00000637720 498 ntBASIC0.47□□□□□ -2.33
FOXA3P55318 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.47□□□□□ -2.33
FOXA3P55318 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
FOXA3P55318 MTND4P16-201ENST00000466108 1367 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC018630.2-201ENST00000534866 2403 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
FOXA3P55318 MIR373-201ENST00000362273 69 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 SNORD3E-201ENST00000362899 217 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 SMIM11P1-201ENST00000369586 178 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 RNU6-72P-201ENST00000384285 79 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.46□□□□□ -2.34
FOXA3P55318 VPS26BP1-201ENST00000417155 755 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.46□□□□□ -2.34
FOXA3P55318 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.46□□□□□ -2.34
FOXA3P55318 AC123900.1-201ENST00000420390 96 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 TXNL1P1-201ENST00000429528 554 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AL117351.1-201ENST00000438864 766 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 MTND1P30-201ENST00000441241 901 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 Z73417.1-201ENST00000447373 778 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.46□□□□□ -2.34
FOXA3P55318 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
FOXA3P55318 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.46□□□□□ -2.34
FOXA3P55318 MIR4769-201ENST00000584126 77 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC105129.3-201ENST00000605455 485 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 MIR15A-201ENST00000607334 83 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC092574.1-201ENST00000609771 420 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC124016.2-201ENST00000610058 665 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC108706.1-201ENST00000611053 297 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC040896.1-201ENST00000613819 479 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AL159153.1-201ENST00000619688 317 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 AC068647.2-201ENST00000637380 353 ntBASIC0.46□□□□□ -2.34
FOXA3P55318 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
FOXA3P55318 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.46□□□□□ -2.34
FOXA3P55318 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.45□□□□□ -2.34
FOXA3P55318 AL589826.1-201ENST00000340697 249 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 SNORD56.1-201ENST00000362913 68 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 RNU5A-8P-201ENST00000364102 114 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 RNU6-395P-201ENST00000365662 106 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 RNU6-331P-201ENST00000384724 107 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 SNORA40.2-201ENST00000390847 128 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 RNU6-1176P-201ENST00000390955 107 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 Y_RNA.623-201ENST00000411128 95 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 HMGN1P14-201ENST00000412459 517 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 MTND4P3-201ENST00000417829 541 ntBASIC0.45□□□□□ -2.34
FOXA3P55318 MTCYBP5-201ENST00000423752 1135 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms