Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AL139396.1-201ENST00000421137 167 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 NUP35P1-201ENST00000422734 947 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 SNAP23P1-201ENST00000433229 246 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 RPS29P6-201ENST00000438196 145 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 AL161651.1-201ENST00000440882 223 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 AC107399.1-201ENST00000451226 265 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 MRPL42P6-201ENST00000486397 371 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 MTCO1P29-201ENST00000496868 288 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 FGF7P4-201ENST00000509595 295 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.69□□□□□ -1.98
CLCNKAP51800 RN7SKP24-201ENST00000515888 284 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 Y_RNA.675-201ENST00000516389 149 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 SNORA43.2-201ENST00000516652 128 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 AL355375.2-201ENST00000574825 175 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 MIR4795-201ENST00000584182 89 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCNKAP51800 POLR3GP2-201ENST00000588366 668 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCNKAP51800 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCNKAP51800 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.69□□□□□ -1.98
CLCNKAP51800 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
CLCNKAP51800 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCNKAP51800 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 RNU6-858P-201ENST00000362436 107 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 SNORA68.1-201ENST00000364537 132 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCNKAP51800 RNU6-306P-201ENST00000384617 107 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC074085.1-201ENST00000413598 418 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 NCOR1P3-201ENST00000420479 303 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 UBE2V1P4-201ENST00000425374 344 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCNKAP51800 RPS15AP7-201ENST00000439294 405 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC009296.1-201ENST00000443146 155 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLCNKAP51800 AC103975.1-201ENST00000482506 483 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCNKAP51800 RPS27P27-201ENST00000498779 255 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AIG1P1-201ENST00000503376 148 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCNKAP51800 SNORA9.3-201ENST00000516383 129 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCNKAP51800 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.68□□□□□ -1.98
CLCNKAP51800 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCNKAP51800 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.68□□□□□ -1.98
CLCNKAP51800 AC007151.1-201ENST00000572774 483 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC016727.1-205ENST00000605437 569 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AL449363.1-201ENST00000617815 186 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 AC097372.5-201ENST00000623665 376 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 U4.7-201ENST00000638126 106 ntBASIC2.68□□□□□ -1.98
CLCNKAP51800 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.68□□□□□ -1.98
CLCNKAP51800 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CLCNKAP51800 MTND4P29-201ENST00000503122 1372 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 Y_RNA.58-201ENST00000362807 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 Y_RNA.61-201ENST00000362835 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 Y_RNA.154-201ENST00000363624 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RNY3P1-201ENST00000365085 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RNY3-201ENST00000365484 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 SET-203ENST00000372688 801 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCNKAP51800 Y_RNA.490-201ENST00000384413 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 Y_RNA.509-201ENST00000384506 99 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 SNORD116-20-201ENST00000384529 92 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RN7SKP158-201ENST00000410453 326 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCNKAP51800 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.67□□□□□ -1.98
CLCNKAP51800 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCNKAP51800 SNORD109B-201ENST00000458961 67 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 SNORD109A-201ENST00000459128 67 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCNKAP51800 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AK3P2-201ENST00000507976 429 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RNU6-377P-201ENST00000515965 102 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 ACA59.2-201ENST00000517061 156 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 GLYCAM1-201ENST00000546596 285 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 TRAV32-201ENST00000553993 340 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CLCNKAP51800 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 RPL12P50-201ENST00000603116 116 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AC009314.1-201ENST00000603871 304 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AP000787.2-201ENST00000604432 568 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CLCNKAP51800 MIR6128-201ENST00000615528 109 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AL359314.1-201ENST00000616913 261 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.67□□□□□ -1.98
CLCNKAP51800 AC244517.12-201ENST00000623581 663 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 AL359757.2-201ENST00000624309 274 ntBASIC2.67□□□□□ -1.98
CLCNKAP51800 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCNKAP51800 Y_RNA.67-201ENST00000362870 100 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 Y_RNA.151-201ENST00000363566 112 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 RNU6-336P-201ENST00000364891 107 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AL513475.1-201ENST00000406602 315 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 RPL37P10-201ENST00000412884 288 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC013470.1-201ENST00000453438 462 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AC018437.1-201ENST00000492214 406 ntBASIC2.66□□□□□ -1.98
CLCNKAP51800 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms