Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 BX295541.1-201ENST00000417774 250 ntBASIC1.96□□□□□ -2.1
RFC4P35249 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC4P35249 AC000111.3-201ENST00000433478 193 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.96□□□□□ -2.1
RFC4P35249 MTND1P26-201ENST00000440488 538 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC4P35249 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC4P35249 RPS27AP8-201ENST00000452665 445 ntBASIC1.96□□□□□ -2.1
RFC4P35249 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.96□□□□□ -2.1
RFC4P35249 AMD1P1-201ENST00000457220 922 ntBASIC1.96□□□□□ -2.1
RFC4P35249 RNU1-123P-201ENST00000458950 160 ntBASIC1.96□□□□□ -2.1
RFC4P35249 BET1P1-201ENST00000482276 359 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.96□□□□□ -2.1
RFC4P35249 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.96□□□□□ -2.1
RFC4P35249 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC4P35249 MTCYBP33-201ENST00000575007 1130 ntBASIC1.96□□□□□ -2.1
RFC4P35249 MIR3682-201ENST00000581338 84 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC098848.2-201ENST00000588023 330 ntBASIC1.96□□□□□ -2.1
RFC4P35249 MIR98-201ENST00000606724 119 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.96□□□□□ -2.1
RFC4P35249 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC092656.1-203ENST00000624134 423 ntBASIC1.96□□□□□ -2.1
RFC4P35249 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.96□□□□□ -2.1
RFC4P35249 RNU1-72P-201ENST00000362976 153 ntBASIC1.95□□□□□ -2.1
RFC4P35249 RNU6-371P-201ENST00000364283 108 ntBASIC1.95□□□□□ -2.1
RFC4P35249 SNORD14B-201ENST00000364533 90 ntBASIC1.95□□□□□ -2.1
RFC4P35249 SNORD48-201ENST00000364953 64 ntBASIC1.95□□□□□ -2.1
RFC4P35249 RNU6-116P-201ENST00000384042 109 ntBASIC1.95□□□□□ -2.1
RFC4P35249 RNY1P14-201ENST00000384426 108 ntBASIC1.95□□□□□ -2.1
RFC4P35249 MIR95-201ENST00000385072 81 ntBASIC1.95□□□□□ -2.1
RFC4P35249 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
RFC4P35249 EEF1A1P40-201ENST00000412883 573 ntBASIC1.95□□□□□ -2.1
RFC4P35249 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AC092447.3-201ENST00000426027 686 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL627311.1-201ENST00000431514 115 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL360271.2-201ENST00000447710 161 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL136380.1-201ENST00000447970 162 ntBASIC1.95□□□□□ -2.1
RFC4P35249 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC4P35249 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.95□□□□□ -2.1
RFC4P35249 RNU5B-3P-201ENST00000516601 115 ntBASIC1.95□□□□□ -2.1
RFC4P35249 SNORA18.6-201ENST00000516792 115 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL158211.1-201ENST00000566763 763 ntBASIC1.95□□□□□ -2.1
RFC4P35249 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.95□□□□□ -2.1
RFC4P35249 MIR4452-201ENST00000583004 71 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
RFC4P35249 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
RFC4P35249 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RFC4P35249 RBBP8P1-201ENST00000449447 1844 ntBASIC1.94□□□□□ -2.1
RFC4P35249 FGF7P2-201ENST00000332473 296 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNU6-942P-201ENST00000363002 107 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNU4-13P-201ENST00000364019 141 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNU6-384P-201ENST00000364900 104 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNU6-72P-201ENST00000384285 79 ntBASIC1.94□□□□□ -2.1
RFC4P35249 C1DP2-201ENST00000418167 426 ntBASIC1.94□□□□□ -2.1
RFC4P35249 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.94□□□□□ -2.1
RFC4P35249 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC4P35249 CALM1P1-201ENST00000442082 433 ntBASIC1.94□□□□□ -2.1
RFC4P35249 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.94□□□□□ -2.1
RFC4P35249 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.94□□□□□ -2.1
RFC4P35249 RNA5SP269-201ENST00000459032 137 ntBASIC1.94□□□□□ -2.1
RFC4P35249 SNORD42A-201ENST00000459584 64 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RPL7P43-201ENST00000478876 753 ntBASIC1.94□□□□□ -2.1
RFC4P35249 AC104806.1-201ENST00000508720 308 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNA5SP102-201ENST00000516865 106 ntBASIC1.94□□□□□ -2.1
RFC4P35249 AC034114.1-201ENST00000520293 285 ntBASIC1.94□□□□□ -2.1
RFC4P35249 AP002453.2-201ENST00000533503 320 ntBASIC1.94□□□□□ -2.1
RFC4P35249 NDUFA5P6-201ENST00000542110 379 ntBASIC1.94□□□□□ -2.1
RFC4P35249 Z94722.1-201ENST00000604328 474 ntBASIC1.94□□□□□ -2.1
RFC4P35249 AC064872.1-201ENST00000604823 1072 ntBASIC1.94□□□□□ -2.1
RFC4P35249 Z84480.1-201ENST00000605131 311 ntBASIC1.94□□□□□ -2.1
RFC4P35249 RNU6-91P-201ENST00000607774 107 ntBASIC1.94□□□□□ -2.1
RFC4P35249 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
RFC4P35249 FARSBP1-201ENST00000435808 1778 ntBASIC1.94□□□□□ -2.1
RFC4P35249 MTND5P35-201ENST00000557537 1720 ntBASIC1.94□□□□□ -2.1
RFC4P35249 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFC4P35249 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RFC4P35249 Y_RNA.201-201ENST00000364052 96 ntBASIC1.93□□□□□ -2.1
RFC4P35249 SNORA62.1-201ENST00000364287 154 ntBASIC1.93□□□□□ -2.1
RFC4P35249 SNORD115-7-201ENST00000365306 82 ntBASIC1.93□□□□□ -2.1
RFC4P35249 Y_RNA.367-201ENST00000365544 101 ntBASIC1.93□□□□□ -2.1
RFC4P35249 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RFC4P35249 MIR1-2-201ENST00000384961 85 ntBASIC1.93□□□□□ -2.1
RFC4P35249 MIR518A2-201ENST00000384966 87 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AL049545.1-201ENST00000401856 572 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC4P35249 MTND2P4-201ENST00000445034 1004 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC4P35249 MED28P2-201ENST00000475771 317 ntBASIC1.93□□□□□ -2.1
RFC4P35249 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AC098862.1-201ENST00000504991 413 ntBASIC1.93□□□□□ -2.1
RFC4P35249 RNU1-86P-201ENST00000516108 154 ntBASIC1.93□□□□□ -2.1
RFC4P35249 Y_RNA.687-201ENST00000516558 91 ntBASIC1.93□□□□□ -2.1
RFC4P35249 RNU1-107P-201ENST00000516617 154 ntBASIC1.93□□□□□ -2.1
RFC4P35249 MIR3913-1-201ENST00000577744 102 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.93□□□□□ -2.1
RFC4P35249 AL138889.2-201ENST00000603883 242 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AC012493.3-201ENST00000604494 112 ntBASIC1.93□□□□□ -2.1
RFC4P35249 AC096772.1-201ENST00000609146 564 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms